Gene PA14_38500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_38500 
Symbol 
ID4380295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3434505 
End bp3435308 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content70% 
IMG OID639325660 
ProductIclR family transcriptional regulator 
Protein accessionYP_791229 
Protein GI116049961 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA ACAGCAGTCC CGCCGAAACC TCCGGCAAGC AGAAGGTCCG CTCCGCCGAA 
GTCGGTACCG ATATCCTCAA GGCCCTCGCC GAACTCTCCC CGGCGACCTC GCTGTCGCGC
CTGGCGGAGC ATGTGGGGAT GCCGGCGAGC AAGGTCCATC GCTATCTGCA GGCATTGATC
GCCAGCGGCT TCGCGGTCCA GGACGCCTCC ACCAATCATT ACTCGCTGGG GCGCGAGGCG
CTGCGCGTGG GCCTGGCGGC GCTGGACAGC ATGGACGTGC TGAAGAGCGC CGCCGCGCCG
CTGGCCGAGC TGCGCGACGT GCTCAACGAG ACCTGCTTCC TCGCCGTCTG GGGCAACCGT
GGAGCCACCG TGGTACAGGT GGAACAGGCG GTGCGCGCGG TGACGGTGGT CACCCAGGTC
GGCTCGGTGC TGCCGCTGCT CGGTTCGTCC ACCGGCCTGG TGTTCGCCGC GTTCCTGCCG
GAACGCGAGG TGGCCGAGCT GCGCGAGGAA GAGTTGGCCG GGCGCGCCGA CCATCCGCTG
GCCGACCCGG CGGCCTATGC GGTGCTGCTG GAGGGCATCC GCGCGCGCGG CCTGCATGCG
ATCCATGGGC TGCTGATGCC TGGGGTGGAA GCGCTCTCGG CGCCGGTGTT CGATGCCCGC
GGGCGGGTGG CGGCGGTGCT CACGGTGGTC GGCCCGGCGA GCATCTTCCA GGCCGAGGAG
CAGGGGCCGG CGGCGGAACG GCTGCTTGCG ACGACTCGGG CTATCAGTTG GCGGATGGGG
TATGACGGCA CCCAGGGTGG ATGA
 
Protein sequence
MEKNSSPAET SGKQKVRSAE VGTDILKALA ELSPATSLSR LAEHVGMPAS KVHRYLQALI 
ASGFAVQDAS TNHYSLGREA LRVGLAALDS MDVLKSAAAP LAELRDVLNE TCFLAVWGNR
GATVVQVEQA VRAVTVVTQV GSVLPLLGSS TGLVFAAFLP EREVAELREE ELAGRADHPL
ADPAAYAVLL EGIRARGLHA IHGLLMPGVE ALSAPVFDAR GRVAAVLTVV GPASIFQAEE
QGPAAERLLA TTRAISWRMG YDGTQGG