Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_38380 |
Symbol | |
ID | 4380304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3420889 |
End bp | 3421521 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639325650 |
Product | putative transcriptional regulator |
Protein accession | YP_791219 |
Protein GI | 116049970 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0126427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCAGGA AAACCAAAGA GGAATCCCAG AAAACCCGCG ATGGCATACT CGATGCCGCC GAGCGGGTTT TCCTGGAAAA GGGCGTGGGC ACCACTGCCA TGGCCGACCT GGCGGACGCC GCCGGGGTTT CTCGCGGTGC GGTCTACGGC CACTACAAGA ACAAGATCGA GGTCTGTCTG GCGATGTGCG ACCGCGCCTT CGGCCAGATC GAGGTACCCG ATGAAAACGC CAGGGTGCCG GCGCTGGACA TCCTCCTGCG CGCCGGCATG GGCTTTCTCC GCCAGTGCTG CGAACCCGGT TCGGTGCAGC GGGTGCTGGA GATCCTCTAC CTCAAGTGCG AACGCAGCGA CGAGAACGAG CCGCTGCTGC GCCGCCGCGA GCTGCTCGAG AAGCAGGGGC AACGCTTCGG CCGACGGCAG ATCCGCCGGG CGGTGGAGCG CGGCGAACTG CCGGCGCGGC TGGACGTCGA GCTGGCCAGC ATCTATCTGC AATCGCTGTG GGACGGCATC TGCGGCACCC TGGCCTGGAC CGAGCGCTTG CGCGACGATC CCTGGAGCCG CGCCGAACGC ATGTTCCGCG CCGGCCTCGA TAGCCTGCGC AGTTCTCCCT ACCTCTTGCT GGCGGACGCC TGA
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Protein sequence | MARKTKEESQ KTRDGILDAA ERVFLEKGVG TTAMADLADA AGVSRGAVYG HYKNKIEVCL AMCDRAFGQI EVPDENARVP ALDILLRAGM GFLRQCCEPG SVQRVLEILY LKCERSDENE PLLRRRELLE KQGQRFGRRQ IRRAVERGEL PARLDVELAS IYLQSLWDGI CGTLAWTERL RDDPWSRAER MFRAGLDSLR SSPYLLLADA
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