| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_38360 |
|---|
| Symbol | |
|---|
| ID | 4380306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3419146 |
|---|
| End bp | 3420507 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639325648 |
|---|
| Product | putative nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_791217 |
|---|
| Protein GI | 116049972 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.0121251 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTAT GCGTGATTGG TGCGGGCTAT GTGGGACTGG TGACGGCGGC CTGTTTCGCC
GAGATGGGCA ACCAGGTGCG CTGCGTGGAG CGCGACCGCG AGCGGGTCGC GCGGCTGAGA
CGCGGCGAGA TGCCGATCTA CGAGCCGGGC CTGGAAAGCA TCCTGCGCGA TCAGCTGGAC
GCCGCCCGCC TGACCTTCAC CGCCAGCCTG GCGGAAGGCC TGGCCGACGC CGAGGTGGTG
TTCATCGCCG TCGGCACGCC GTGCGGCGAG GACGGCTCGG CCGACCTCAG CCACGTGATG
GCGGTCGCCG AGCAACTTGG CGCGCAACTG CGCCAGGCCT GCATCGTGGT CAACAAGTCG
ACCGTGCCGG TGGGCACCGC CGAACGGGTC GAAGAGATCA TCCGCCTGGG CCTGGCGCGC
CGGCGCAAGC GCTTCCGGGT GGCGGTGGCG AGCAATCCGG AGTTCCTCAA GGAAGGCTCG
GCGGTGGACG ACTTCAGGCG CCCGGACCGG GTCATCATCG GCAGCGCCGA GGCGCAGGCC
GGGGAAACCC TGCGCCAGCT CTACGCGCCG TTCCTGCGCA ATCACGAACG GGTCCTGCTG
ATGGGGCGCC GCGAGGCCGA GTTCAGCAAG TACGCGGCCA ATGCCTTCCT CGCCACCAAG
ATTTCCTTCA TGAACGAGAT GGCCGGGCTG TGCGCCCTCA CCGGCGTCGA CATCGAGGAC
GTGCGCCGTG GCATGGGCAG CGACAAGCGC ATCGGCACCC ATTTCATCTA CGCCGGCTGC
GGCTACGGCG GCTCGTGCTT TCCCAAGGAC GTCCGCGCGC TGATCCGCAG CGCCGAGCAA
CAGGGCTTCG ACAGCCAGAT ACTGCGTGCG GTGGAAGCGC GCAACGCGCG GCAGAAGGAA
CTGCTCTTCG AGACCCTCGG CGAGCTGTTC CAGGGACGCT GGCAAGGGCG CACGGTGGCG
CTCTGGGGGC TGGCCTTCAA GCCGGGTACC GACGACCTGC GCGAGGCGCC GAGCCTGGTC
CTGCTGGAGG CGCTGCTGCG CCACGGGGTG CGGGTCAGGG CCCATGACCC GGTGGCCAAC
GCCGGGGTCG CGGCACGCTA TCCGGACGCG CTGGCGTGCG CCCAGTTGAC GCTCCACGAC
TCGCCCTACG CCGCCGTCGA GGGCGCCGAT GCCCTGGTGC TGGTGACCGA GTGGAAACAG
TTCCGCCAGC CGGACTTCCA GAAAATCCGT GGATCCATGC GAACTCCCCT GTTGGTCGAC
GGTCGGAATC TCTACGCACC GGCGCGGATG GCGGAACTGG GCTTCATCTA CCAGGGCATA
GGACGTCCAA GGGCCGGGCA TTGTAAGGCG AGCGCAGCCT GA
|
|---|
| Protein sequence | MRLCVIGAGY VGLVTAACFA EMGNQVRCVE RDRERVARLR RGEMPIYEPG LESILRDQLD
AARLTFTASL AEGLADAEVV FIAVGTPCGE DGSADLSHVM AVAEQLGAQL RQACIVVNKS
TVPVGTAERV EEIIRLGLAR RRKRFRVAVA SNPEFLKEGS AVDDFRRPDR VIIGSAEAQA
GETLRQLYAP FLRNHERVLL MGRREAEFSK YAANAFLATK ISFMNEMAGL CALTGVDIED
VRRGMGSDKR IGTHFIYAGC GYGGSCFPKD VRALIRSAEQ QGFDSQILRA VEARNARQKE
LLFETLGELF QGRWQGRTVA LWGLAFKPGT DDLREAPSLV LLEALLRHGV RVRAHDPVAN
AGVAARYPDA LACAQLTLHD SPYAAVEGAD ALVLVTEWKQ FRQPDFQKIR GSMRTPLLVD
GRNLYAPARM AELGFIYQGI GRPRAGHCKA SAA
|
|---|
| |