Gene PA14_38300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_38300 
Symbol 
ID4385861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3413948 
End bp3414421 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content59% 
IMG OID639325642 
Productputative transcriptional regulator 
Protein accessionYP_791211 
Protein GI116049978 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0128903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATTC CACTGGATAT GTACGATCAG CGTATTCTCG CTTTGCTGCA GGAGGAATCC 
TCGCTTTCCA CCGCCGAGAT CGCCGAGCGC ATCGGACTTT CCCAGTCGCC CTGCTGGCGG
CGCATCCAAC GCCTGAAGGA GGAGGGGGTG ATCCGCAAGC AGGTGACCCT GCTCGACCGC
AAGAAGATCG GCCTGAATAC CCAGGTATTC GCCCAGATCA AGCTCAACGC CCATGGGCGC
AAGAACCTCA CCGACTTCGC CGAGGCGATG CACCAGTTTC CCGAGGTGCT GGAGTGCCAC
GTACTGATGG GCGCGGTGGA CTTCATGCTG CGTATCGTCA CCCGCGATAT CGAATCCTAC
GAACGCTTTT TCTTCGAGAA GCTGTCGGCG GTGCCGGGCA TCCAGGAAGT GAACTCCATC
GTCGCCTTGT CGGAAATCAA ATCCACCACT ACCTTGCCCC TGCTCGCTCC CTGA
 
Protein sequence
MSIPLDMYDQ RILALLQEES SLSTAEIAER IGLSQSPCWR RIQRLKEEGV IRKQVTLLDR 
KKIGLNTQVF AQIKLNAHGR KNLTDFAEAM HQFPEVLECH VLMGAVDFML RIVTRDIESY
ERFFFEKLSA VPGIQEVNSI VALSEIKSTT TLPLLAP