| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_38200 |
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| Symbol | |
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| ID | 4385868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3408055 |
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| End bp | 3409713 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639325635 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_791204 |
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| Protein GI | 116049985 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.00112999 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGACT CCCTTCCCCA GCGCAACGGC GGGCAGATCC TGGTAGAGGC ATTGCGGCGC
AATGCCGTCG ATACCGTCTA CTGCATCCCC GGGGAAAGCT ACCTGCCGGT GCTCGACGCG
CTGTACGACG CCGACGGCAT CCGCACCATC GTCACCCGCC ACGAGGGTGC CGCCTCGAAC
ATGGCCGATG CCTACGGCAA GCTGACCGGC CGACCAGGCA TCTGCTTCGT CACCCGCGGC
CCCGGTGCCA CCCATGCGGC GAATGGCGTG CACACGGCGC AGCAGGACTC GACGCCGATG
ATCCTGTTCG TCGGCCAGGT GGAAAGCGCC TTCAAGGGCC GCGAGGCATT CCAGGAAGTC
GACTACGTGC AGATGTTCTC GGGCCTGGCC AAGTGGGCCG TGGAAATCGA CCGTATCGAA
CGCATCCCGG AGCTCGTCGG CCGCGCCTTC AGCGTCGCCA CCTCGGGCCG ACCGGGGCCG
GTCGTGGTCG CCCTGCCCGA GGAAATCCTC TTCGGTTCCG CGCAGGTCGC CGATGCGCCG
GTGCCAAGGG TGCTTCCGGG GCGGCCGGGC GCCACGGCGA TGGCGGAACT GCGCGAACTG
CTGGCGAACG CCAGGCGCCC CCTGCTGGTA CTTGGCGGCA GCGGCTGGGA CAGCGCCGCC
AGGAAACGGC TAGGCGCCTT CGTCGAGGCC AATGGCCTGC CGGTGGCCAC ATCGTTCCGT
CGCCAGGACC TGTTCGACAA CCGCGACCCG CACTACGCCG GGCAACTGGG CTTCGGCGCG
GCGCCGGCGC TATTGGAGCG GCTGCGCCAG GCCGACCTGC TGCTGGTGGT CGGGGCGCGC
CTGGGCGAAA CGCCGAGCGC TGGCTACAGC CTGGTGCGTA GTCCGGCCCC CGCGCAGACG
CTGATCCACG TGCATCCGGA CAGCGCGGAA TTGAACCGCG TCTACCTGGC GCGACTGCCG
ATCCAGGCCA CCCCGTGTGC CTTCGCCGAG GCCCTGGCCG ACCTCGCTCC GTTGCCCTCG
AGCACCTGGC AGGACTGGCG CGAAGCCGCC CATGCCGACT ACCTGGCCTA CTCGACCCCG
GCCGCGAGCG ACCCCGCCAT CCAGGGCGTC GACCTGGCGT CCGTGGTCGC GTACCTCAGC
GAAAACCTGC CGGACGACGC GGTGATCGCC AACGGTGCCG GCAATTATGC CGTCTGGGTG
CATCGCTTCT ACCGCTATCG CCAGGCCCGC ACGCAGTTGG CGCCGACCAA CGGCGCCATG
GGCTACGGCC TGCCCGCCGC GATCGCCGCC AGCCTACGCG ATCCGCAGCG CAGCGTGGTG
TGCTTCGCCG GCGACGGCTG TTTCATGATG TATCCGCAGG AGCTGGCGAC CGCCGCGCAG
TTCGGCGCGA CGCCGGTGGT GATCGTGGTC AACAACGGCA TGCTCGGCAC CATCCGCATG
CATCAGGAAC GCGAATATCC CGGGCGGGTA TCCGCCACCC GCCTGGACAA CCCCGACTTC
GTCGCCCTGG CGCGAGCCTT CGGCGCCCAC GCCGAACGAG TGGAATGCAG CGCCGACTTC
CCCGCCGCGT TCCGCCGCGC CCGCGAAAGC GGACGCCCGG CGCTGCTGGA GCTGCTGACC
GACCCACGCC AGATCACGCC GCAGGCGCGC CTCGCCTGA
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| Protein sequence | MSDSLPQRNG GQILVEALRR NAVDTVYCIP GESYLPVLDA LYDADGIRTI VTRHEGAASN
MADAYGKLTG RPGICFVTRG PGATHAANGV HTAQQDSTPM ILFVGQVESA FKGREAFQEV
DYVQMFSGLA KWAVEIDRIE RIPELVGRAF SVATSGRPGP VVVALPEEIL FGSAQVADAP
VPRVLPGRPG ATAMAELREL LANARRPLLV LGGSGWDSAA RKRLGAFVEA NGLPVATSFR
RQDLFDNRDP HYAGQLGFGA APALLERLRQ ADLLLVVGAR LGETPSAGYS LVRSPAPAQT
LIHVHPDSAE LNRVYLARLP IQATPCAFAE ALADLAPLPS STWQDWREAA HADYLAYSTP
AASDPAIQGV DLASVVAYLS ENLPDDAVIA NGAGNYAVWV HRFYRYRQAR TQLAPTNGAM
GYGLPAAIAA SLRDPQRSVV CFAGDGCFMM YPQELATAAQ FGATPVVIVV NNGMLGTIRM
HQEREYPGRV SATRLDNPDF VALARAFGAH AERVECSADF PAAFRRARES GRPALLELLT
DPRQITPQAR LA
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