| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_37910 |
|---|
| Symbol | |
|---|
| ID | 4382346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3383604 |
|---|
| End bp | 3384506 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639325613 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_791182 |
|---|
| Protein GI | 116050005 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.000602426 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.0887271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGA ATGCCGTCAA GTTGCTCGCC CGCGTGGCCG AGACCCGTAG CTTCACCCAG
GCCGCCGTTT CCCTCGGTCT GACCCAGTCC GGCCTGTCGC GCGCCATCGG CCGGCTGGAA
GCCGAACTCG GCGTGCGTCT GCTGCACCGC ACCACCCGCA GCGTCAGCCT GACCCCGGAC
GGCCAACTGT TCTACGAGCG CTGCGCACCC TTGCTGGCGG AGCTGGAGGA AGTCGAGAAG
TTGCTGGTGG ACCGCCAGTG CGCGCCGAGC GGTCCGCTGA AGATCACCAC CCCGCAGGCG
CTCGGGCGGA TCGTGATCAT GCCGGTGCTG CGCGAACTGA CCCGGCGCTA CCCGCAATTG
CAGATCGAGG CGGCGATGAC CGATCGCCTG GTCGACCTCA CCGAGGAAGG CTTCGACGCC
GCCGTGCGTC TCGGTCGGGT GGGCGACGTG CGCCTGATCG CCCGGCCATT GGCGGCGTTG
CGCTGGGTCA CGGTGGCGTC GCCGGAATAC CTGCGCAGTC ACGGCACGCC GGAGCGCCTG
GAGCAACTCG CCGGGCACAA CTGCCCGACG GTGCGCGACC TGCACACCGG CAAGCTGCTG
GAATGGCAGT TCCAGCGCGA CGGCCAGCCG CTGAGCCTGG CGGTGCGCGG CGACCTGGTG
CTGGACGTGG CCGACGCGCT GGTCGACGCG GCGCTGGTCG GCCAGGGCAT CGTCCAGGTG
ATGGGCTTCA TGGCCGAGGA GGCGATCCGC CGGCGTCGAC TGGTACGCAT CCTCCAGCCG
TTCGAACCGC CGCTGTGCCC GGTGTCGCTG ATCTACCCGC CGTCGCGGCA GTGCTCGCTG
AAGATCGGCG CGCTCTACGA GGAACTGAAG AGCGCGCACT GGTGCGGGGC GCTGACGTAC
TGA
|
|---|
| Protein sequence | MDLNAVKLLA RVAETRSFTQ AAVSLGLTQS GLSRAIGRLE AELGVRLLHR TTRSVSLTPD
GQLFYERCAP LLAELEEVEK LLVDRQCAPS GPLKITTPQA LGRIVIMPVL RELTRRYPQL
QIEAAMTDRL VDLTEEGFDA AVRLGRVGDV RLIARPLAAL RWVTVASPEY LRSHGTPERL
EQLAGHNCPT VRDLHTGKLL EWQFQRDGQP LSLAVRGDLV LDVADALVDA ALVGQGIVQV
MGFMAEEAIR RRRLVRILQP FEPPLCPVSL IYPPSRQCSL KIGALYEELK SAHWCGALTY
|
|---|
| |