| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_37880 |
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| Symbol | |
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| ID | 4382348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3378573 |
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| End bp | 3380381 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639325611 |
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| Product | putative binding protein component of ABC transporter |
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| Protein accession | YP_791180 |
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| Protein GI | 116050007 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00173754 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.230207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGAC GCATCCTGGT CTTCGCCTGC TGCCTGCTCG CCAGCCTGGC CCGCAGCGAG
CCGCGCCATG CCATCACGCT CTACGACGAG CCGGCGAAAT ACCCGCCGGG TTTCCAGCAC
TTCGACTTCG TCGACCCGCA GGCGCCCAAG GGCGGCAGCC TGCGGCGGAT GGAAAGCGGC
AGCTTCGACA CGCTGAACCC CTTCGCCAAC CGCGGCACGC CGATCAGCAT GACCCAGGCC
GCGCTGATCT ACGAAACCCT AGGCTTCCAG TCGCTGGACG AGCCGTTCAC CGAATACGGC
TACCTGGCGC GCTACATCGA GAAAGCCCCG GACAACAGCT GGGTGCGTTT CCATATTGAT
CCGCGGGCGC GCTTCAGCGA CGGCGTGGCG GTCACCGCCG AGGACGTGAA GTTTTCCTTC
GACAGCCTGG TCGAGCAGGG CAGCCCGTTC TGGCGCGCCT ACTACAAGGA GGTCCTCGAG
CCGGTGGTGG AGGACCGCCT GCGCATCCGC TTCGACTTCC GTCATGCCGG CAACCGCGAA
CTGCCGCTGG TGCTGGCCCA GCTCTACGTG CTGCCCAGGC ATTGGTGGCA GGGACGCGAC
TTCAACCGCA GCAGCATGCA GCCGCCGCTG GGCAGCGGAC CTTACCGGCT GGAGAAGGCC
GAGGCGGGGC GTTCGGTGAG CTACCGGCGC AACCCCGACT GGTGGGCTCG CGACCTGCCG
GTCGGGCGTG GCCTGTACAA CTTCGAGCGG ATCCGTTTCG ACTACTACCG CGACAGCGGC
GTGGCCTTGC AGGCGTTCAA GGCCGGGCAG GCCGACATCA ATGTCGAGAC CAGCGTCAAG
GCCTGGAGCA GCGGCTACGA CTCGCCGGCC CTGCGCGATG GCCGGTTGCG CCAGGAGAGC
TTTCCCTACC CGTACCCGGC CAGCCTCCAG GGCCTGGTGT TCAACCTGCG CCGGCCGCTG
TTCGAGGACC GCCGGGTACG CCAGGCGCTG AGCCTGCTGT TCGACTTCGA ATGGACCAAC
CGGCAGCTCT TCGGCGGTCG CTACAAGCGC CTGCGCAGCT ATTTCGACAA CTCGGAGATG
GCCGCTCGCG GCCTGCCCGG CGCCGACGAA CTGGCCTTGC TGGAGCCGCT GCGTGGGCAG
ATCCCCGAGG AGGTCTTCGG CCAGGCCTAC GCTCCGCCGG TGAACGACGG CAGCGGCGAT
ATCCATGAGC GCCTGGTGCA GGCCTACCGC CTGCTCGGCG AGGCCGGCTG GCATGCCGTC
GAAGGACGCC TGCTGGATAC CGCCGGACGG CCGCTGCGCT TCGAACTCCT GCTCCAGGGC
AAGGGCCTGG AGCGCGCGCT GCTGCCGTTC CAGCGCAACC TGGCGCGGAT CGGCATCGAT
ATGCGCCTGC GCCAGGTGGA CGCTTCGCAA TACATCGAGC GCATACGTGC GCGGGACTAC
GACATGATCG TTTCGAGCTT CTCCCAGTCC AATTCGCCGG GCAACGAGCA GTACAGCTTC
TGGCATTCCT CCAGCTACGC CGATCCCGGC GGCTACAACC GCATCGGCCT GAAGGACCCG
GCCATCGACC GGCTGGTGCA GGCGGTGGTC GAGGCCGACT CGCGGGCCGC CCTGGAAACC
GCCGTGCGCG CCCTCGACCG GGTGCTGCAA TGGGGCTACT ACCTGATCCC GACCTGGTAT
TCCGACGAGG TCTGGATCGC CAGCTGGAAT CGCTTCGGCC GACCGCCGCA GGCGCCGCGC
TACAGCCTGG GGCTGAACAC CTGGTGGGAA GTCCGCGAGC GGGCCGTGCC GAGCCGGCAG
GCGCAGTGA
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| Protein sequence | MPGRILVFAC CLLASLARSE PRHAITLYDE PAKYPPGFQH FDFVDPQAPK GGSLRRMESG
SFDTLNPFAN RGTPISMTQA ALIYETLGFQ SLDEPFTEYG YLARYIEKAP DNSWVRFHID
PRARFSDGVA VTAEDVKFSF DSLVEQGSPF WRAYYKEVLE PVVEDRLRIR FDFRHAGNRE
LPLVLAQLYV LPRHWWQGRD FNRSSMQPPL GSGPYRLEKA EAGRSVSYRR NPDWWARDLP
VGRGLYNFER IRFDYYRDSG VALQAFKAGQ ADINVETSVK AWSSGYDSPA LRDGRLRQES
FPYPYPASLQ GLVFNLRRPL FEDRRVRQAL SLLFDFEWTN RQLFGGRYKR LRSYFDNSEM
AARGLPGADE LALLEPLRGQ IPEEVFGQAY APPVNDGSGD IHERLVQAYR LLGEAGWHAV
EGRLLDTAGR PLRFELLLQG KGLERALLPF QRNLARIGID MRLRQVDASQ YIERIRARDY
DMIVSSFSQS NSPGNEQYSF WHSSSYADPG GYNRIGLKDP AIDRLVQAVV EADSRAALET
AVRALDRVLQ WGYYLIPTWY SDEVWIASWN RFGRPPQAPR YSLGLNTWWE VRERAVPSRQ
AQ
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