Gene PA14_37830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_37830 
Symbol 
ID4382352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3373541 
End bp3374722 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content71% 
IMG OID639325607 
Productputative pyridoxal-phosphate dependent enzyme 
Protein accessionYP_791176 
Protein GI116050011 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000488408 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.177664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGT TACCGTTGTA CTTCGATTAC GCCGCCACCA CGCCCGTGGA CGAGCGCGTG 
ATCCGGGCCA TGGTGGAGTG TCTCGGCTAC CAGGCGTGTT TTGGCAATCC CGCGTCGAAT
TTCCATGCCT ACGGCCGCCA GGCGCGGCGG GCAGTGGAGC GGGCCAGGGA GCAGGTGGCC
GCGCTGGTCG GCGCCAGCGC CGGGCAGATC GTCTGGACTT CCGGCGCCAC CGAATCCAAC
AACCTGGCCC TCAAGGGCGT GGCCCAGGCG CTGGACGCAC CCGGCCACCT GATCACCAGT
CGCCTGGAGC ACAAGGCGGT GCTGGACACC GTGCAGCAAC TCGCCGATGA CGGCTGGAGC
GTGACCTGGC TGGCGCCCGG CACCGATGGC CTGATCCGGC CGGAACAGGT GGAGGCGGCC
TGGCGCGCCG ATACCCGTCT GGTGTCGCTG ATGCGGGTCA ACAACGAACT CGGCACCCTG
ACCGACATCG CCGCCATCGG CGAACGGGTG CGCGAGCGCG GCGCGCTGTT CCACGTCGAC
GCGGCGCAGG CCAGCGGCAA GGTGGCGATC GACCTGGGCC GCCTGGCGGT GGACTTGATG
TCGTTCTCCG CACACAAGAC CTACGGGCCC AAGGGCATCG GCGCGTTGTA CGTCGGGCCG
CGCGCCGAGC GGCGGCTGAA GGCGCAGATC CACGGCGGCG GACACGAGCA GGGCCTGCGT
TCCGGGACCC TGGCGACCCA CCAGATCGTC GGTATGGGCG AGGCCTTCGC CCTCGCCGGC
GAGCTTTTCG AGGAGGAGGG CAGGCGCATC GCCGGACTCC AGCGGCGTCT GCTGGAGGGG
CTGGCGCAGA TCGACGGCTG GCGCCTGAAC GGCAGCGCCG ACGCACGCAT CGCGCATACC
CTGAACCTGA CCTTCGACAA CCCGGCCTTT GTCCCCCAGG CACTGGAGTC CAGCCTGGCG
GTGTCCAGCA CCTCGGCCTG CAACTCGGCG CGGCCGGCGC CGTCCCACGT GCTTCTCGCC
CTCGGCCACG ATGCCGCCAG CGCTGGCCGC AGCGTCCGCC TGAGCCTCGG TCGCTACACC
CGCGAGGCCG ACGTCGACGC GGCGGTGGCC GCCCTCAAGG CCGCGGCGGA TAGTGGCGCG
CCGGCGTGGC AGCCGTTCCT CGGGGTATCC AGGGCAGGCT GA
 
Protein sequence
MSSLPLYFDY AATTPVDERV IRAMVECLGY QACFGNPASN FHAYGRQARR AVERAREQVA 
ALVGASAGQI VWTSGATESN NLALKGVAQA LDAPGHLITS RLEHKAVLDT VQQLADDGWS
VTWLAPGTDG LIRPEQVEAA WRADTRLVSL MRVNNELGTL TDIAAIGERV RERGALFHVD
AAQASGKVAI DLGRLAVDLM SFSAHKTYGP KGIGALYVGP RAERRLKAQI HGGGHEQGLR
SGTLATHQIV GMGEAFALAG ELFEEEGRRI AGLQRRLLEG LAQIDGWRLN GSADARIAHT
LNLTFDNPAF VPQALESSLA VSSTSACNSA RPAPSHVLLA LGHDAASAGR SVRLSLGRYT
READVDAAVA ALKAAADSGA PAWQPFLGVS RAG