| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_37745 |
|---|
| Symbol | |
|---|
| ID | 4384134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 3364838 |
|---|
| End bp | 3366562 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639325600 |
|---|
| Product | carbamoyl transferase |
|---|
| Protein accession | YP_791169 |
|---|
| Protein GI | 116054447 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2192] Predicted carbamoyl transferase, NodU family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0813971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.12904 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATTC TCGGGATCAC CAACAACGAC CTGGCCGGCG CCTGCCTGGT GCGCGACGGC
GGGATCGTCG CCGCCGCCAG CGAGGAGCGC TTCACCCGCC AGAAGGACCA CAAGGCCTGG
CCGAGCCGCT CCATCGACTA TGTGCTCGGC GAGGCCGGCA TCGACCTGGC CGACATCGAC
CGCATCGCCT ACGGCTGGAA CGCCGGGTTC GACGCCGGGC GGCACCTCGA CCTCTACCTG
GACCGGGTCC TCGAGGAAAC CCGCGAGCGT CCCGAGGGCC TGCCGCACCT GCGCAAGCGG
ATCGCCGACG AGATGGCCAA CGACAAGGCC AAGCGCGGCG AATTCGATGC CTTCGTCCGC
GCCAACGGCC TGCGCGGCAA GGTCGAGTAC ATCGACCATC ACGAATGCCA CGCCCTCGGC
GCATTCGTCT GCTCGCCGTT CGACGAGGCG CTGACCCTCA CCTGCGACGG CCGCGGCGAC
TTCCAGTCGC TCACCGTCAC CCACTACCGC GCCGACGGCG GCGAGACGGT CCTGCAACGC
GAGACCAGCG TCGACAGCCT GGGCTACTTC TACGGGCGCA TCACCCGCCT GCTCGGCTTC
AAGCCGAACC GCCACGAAGG CAAGATCACC GGCCTGGCGG CGTTCGGCGA CGCGGAAAAG
CTGCTGCCGC TGATGAACGA CATGATCCGC CTGGAGAACG GCCGCCTGCG CGCCCGCTGC
GGCGAACTGT ACCTGCCCTC CTACGACGGC TACAGCGATC CGCTGCTGCA ACGCTGCGCG
GCGGAACGCC CGGCGGATGT CGCCGCCGCC GCGCAACGGC ACTCCGAAGA CCTGCTGGTG
GCCATCGCCC GGCAGCACGT GGCGCGCACC GGTTGCGCCA ACCTGTGCCT GGCCGGCGGG
GTGTTCGGCA ACGTCAAGCT GAACCAGCGC CTGCGCGAGA TCCCCGGGGT CCGCGATGTC
TACGTGCTGC CCTGCATGGG CGACGGCGGC CTGGCCCTGG CCGCGGCGGT GGCGGTGGCC
TATCGCGAGA ACGGTACGCG CTTCCCGGCG CCGAGCATGG CCCTCGGGCC GGACGCGCGC
AGCGCCGCGC AGAATGCCGA GCTGATCGCC AGCCAGTACC CGCAGCTGGC CTACAGCCGG
CCAGCCAACC TGATCGAGAC GCTGGTCGAA GCGCTGCGGG AAAACCAGGT GCTGGGCATG
TTCAAGGGCC GCATGGAGTT CGGTCCGCGC GCCTTGTGCA ACCGCAGCAT CGTCTACCAT
CCCGGCGATG CCAGCGCCAA CGACTGGCTC AATCAGCGCA TGGAACGCAC CGAGTTCATG
CCATTCGCCC CGGTCACCGC GGTCGAGCAC GCCGAGGGCT GCTACATCGG CTGGCGCGAA
GACCAGGTGG CGGCCGACTA CATGACCATG ACCTACGACT GCCATGCGGA TTTCCGCGAG
CGCTGCCCGG CGGTGGTGCA TGTCGACGGC ACCGCCCGGC CGCAGATCAT CCGGCCGCAG
GCCGATCCGT TCATGCACGC CCTGCTGCAT GCCTGGCATG CCCGCAGCGG CCAGCCGGCG
CTGATCAACA CCTCCTTCAA CCGCCACGAG GAACCGATCG TCTGCGCCCC GCAGGACGCC
CTCGGCGCGC TGGAGGACGG CATGGTCGAC CTGGTGGTGC TGGGCGAGTC CCTGCTGGTC
TGGCGCAAGG GCGAGAACGC CTTCGCCAGG GCGCGCTTCG AGTGA
|
|---|
| Protein sequence | MIILGITNND LAGACLVRDG GIVAAASEER FTRQKDHKAW PSRSIDYVLG EAGIDLADID
RIAYGWNAGF DAGRHLDLYL DRVLEETRER PEGLPHLRKR IADEMANDKA KRGEFDAFVR
ANGLRGKVEY IDHHECHALG AFVCSPFDEA LTLTCDGRGD FQSLTVTHYR ADGGETVLQR
ETSVDSLGYF YGRITRLLGF KPNRHEGKIT GLAAFGDAEK LLPLMNDMIR LENGRLRARC
GELYLPSYDG YSDPLLQRCA AERPADVAAA AQRHSEDLLV AIARQHVART GCANLCLAGG
VFGNVKLNQR LREIPGVRDV YVLPCMGDGG LALAAAVAVA YRENGTRFPA PSMALGPDAR
SAAQNAELIA SQYPQLAYSR PANLIETLVE ALRENQVLGM FKGRMEFGPR ALCNRSIVYH
PGDASANDWL NQRMERTEFM PFAPVTAVEH AEGCYIGWRE DQVAADYMTM TYDCHADFRE
RCPAVVHVDG TARPQIIRPQ ADPFMHALLH AWHARSGQPA LINTSFNRHE EPIVCAPQDA
LGALEDGMVD LVVLGESLLV WRKGENAFAR ARFE
|
|---|
| |