Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_37730 |
Symbol | |
ID | 4380313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3362016 |
End bp | 3364658 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639325599 |
Product | putative TonB dependent receptor |
Protein accession | YP_791168 |
Protein GI | 116050018 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.951701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.164066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCGAT CGCTCCACAC CGACCCGCCG CTGGGCGCCG CCCTGCTGCT GGCCCTGCAG CTCGCTCCCA GCAGCGCCGC CGCGGCGGAG GGACAGGCGC CTGTCGACCC GCCCACGGTC CAGTTGCAAC GAATCGAGGT GACCGGTAGC GCGATCCGCC GGGTCGATGC GGAAACCGCG GTGCCGATCA GCGTCCTGCG CGCCGAGGAG CTGCGCCAAC AGGGCGTGAC CAGCACCGAG GAACTGATCG GCCGGCTTTC CGGCAACCAG GGCGTATACA ACTCCAGTCG CTCGGTCGGC AGCGCCACCG GCGGCGCCTC GTTCGCCGAC CTGCGCGGGA TCGGCGCGAA CAAGACCCTG GTGCTGCTCA ACGGCCGGCG TCTGGCGAAC AATGCCATCG ACGGCTCCGC CGTGGATCTC AACACCATTC CCTTCGCCGC CATCGACCGG GTCGAGGTGC TGCGCGACGG CGCCTCCGCA CTGTACGGCA CCGATGCCAT CGGCGGGGTG ATCAACTTCA TCACCCGCAA GAGCCTGAAC GAAGGCCGCG TCGACAGCGG CTACGCCTCC CCCACCCAGG ACGGCGGCGG CAACCAGCGC AACGTCAGCG CTAGCTGGGG CTTCGGCGAG CTGGAGGAGG ATCGCTTCAA TGTCTTCGCG GTGGCCAACT ACGACAAGCA GGAACGCCTC GGCGCCAAGG ACCGCGGCTA CACCTACAAC TACCAGCCGG GACGCGGCCT CGACTACAGC TCCGGCACCG CCTTCCCCGG CAACTGGAGC CAGGGCGCCA ACGCCAGCAA TCCGCTGGCC GCCGGCGGTT GCAAGGGCGC CGACCTGATC CCGCGCAACG GCATCTGCCG GCAGAGCCTG TGGCGCTACC TCGACCTGGT GCCGGAAACC GAGAAGACCT CGGTGTTCAG CCGCGCCACC GGCAAGCTGG CCGACGAGCA CAACGTCAGC CTGGAGTACT TCTGGTCGCG CAACGACAAC GCTACCCAGG TCGGCCCAGG GACCCTCACC GGCCTGCAGA TCGATCCCGG CACCGCCTTC TATCCCGGCA ACGGCATCAC TCCCGGTCCC GGCGGCTTCG TCCTCGACCC GAGCCGGCCG GTGGAGGTCA ACTGGCGGCA GAGCGTGCTC GGGCCACGCC TGCAATCCTC GCAGAACACC GGCCAGCGCC TGCTGCTCGG CTTCGACGGC CAGTTCGCCG GCTGGGACTA CGATATCGGC GCCTCGTACA ACCAGAACAA GGTGGTCGAC CATATCCACA GCGGCTACGT CGACGATCGC GCCGCCGCCC TCGGCATCGC CAACGGGACG CTGAACCCGT TCGGGCCGCA GACCGACGCC GGCCTCGCCT ACCTCGGCAG CCATGCCCTG AGCGGCGACT TCCGTACCTC GGTCGGCCGC GTCAAGGGCC TGGACGCCCG CGCCAGCCGG GAGATCGGCG ACTGGTTCGG CGCCGGGCCG GCGGCCCTGG CGCTGGGCGG CGAATTCCGC AAGGAAGCGT TCCACCAGGA CATCCAGGAC TTCGCCGGCA ACGTGCAGAG CCTCGGCGTC GATCCCGCCG CCACGGTCAG CGGCGAGCGC AACCTGAAGG CGCAGTACGC CGAACTCAAC GTGCCGGTGC TGGACAGCCT GGAACTCAGC GCGGCGATCC GCCACGACAA GTACAGCGAC TTCGGCAGCA CTACCAACCC GAAATATTCG TTCCGCTTCC AGCCGTTCCG CCAGTTGGTC CTGCGCGGCG CCTACAGCGA AGGTTTCCGC GCGCCGTCGC TGTACGAACT GTACAACCCG ACCTTCACCA CCTATACCAG CGCCAACTAC GACGACCCAC GCCTGTGCGC CGGCGGCCAG CCGAGCCAGG GCGGCATCGC CAACCGCGAC TGCGCCCAGC AGTTCTACAA CGCCACCGGC GGCAACACCG ACCTGCGACC GGAAACCGCG CGCAACGTTA CCCTGGGCCT GGTCTACCAG CCGCTGCGCG ACCTTTCCGT CGGCCTGGAC TTCTGGTGGA TCAGGATCGC CAACCAGATC GCCGAGTTTC CCGAAGCGGC GATCTTCGCC GACCCGCAGG CCTACGCCGG ACGCATCGTG CGCAAGGCCG ACGGCTCGAT CGATCACGTC GTCACCGGAC TGGCCAACCT CGGCAAAGTG AAGACCAGCG GCGTCGACCT GAGCCTCGAT TATCGTTTCC CGGCCAGCCG CTACGGGCAG TTCGGGCTCG ACCTGCAAGG CACCTACGTG TCCCGCTACG ACTTCCAGCA GCAGATCGGC GGCCAGTACC TGGACAACGT CGGCGACTTC CAGGGCGTCG GCGTGATCGC CCGCTGGAAG CACGTCGCCA ACGCCACCTG GAGCCGCGAC GCCTGGCAGG CCACCCTGAG CAACCGCTAC ACCAGCGGCT ACAACGACTA CGATCGCGCC AGCCACGGCA GGGTCGGCTC GTGGAACCTC TGGGACCTGG CCGGCAGCTA CCGCCTCAGC CATGCGCTGG GGCTGACCCT CGGGGTGAAG AACCTGTTCG ACCGCGAACC GCCGTTCAGC AACCAGACCT ACACCTTCCA GAGCGGCTAC GACCCGCGCT ACACCGATCC CTACGGGCGC ATCCTGTTCG GCCGCCTCAG CTACAGCTTC TGA
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Protein sequence | MHRSLHTDPP LGAALLLALQ LAPSSAAAAE GQAPVDPPTV QLQRIEVTGS AIRRVDAETA VPISVLRAEE LRQQGVTSTE ELIGRLSGNQ GVYNSSRSVG SATGGASFAD LRGIGANKTL VLLNGRRLAN NAIDGSAVDL NTIPFAAIDR VEVLRDGASA LYGTDAIGGV INFITRKSLN EGRVDSGYAS PTQDGGGNQR NVSASWGFGE LEEDRFNVFA VANYDKQERL GAKDRGYTYN YQPGRGLDYS SGTAFPGNWS QGANASNPLA AGGCKGADLI PRNGICRQSL WRYLDLVPET EKTSVFSRAT GKLADEHNVS LEYFWSRNDN ATQVGPGTLT GLQIDPGTAF YPGNGITPGP GGFVLDPSRP VEVNWRQSVL GPRLQSSQNT GQRLLLGFDG QFAGWDYDIG ASYNQNKVVD HIHSGYVDDR AAALGIANGT LNPFGPQTDA GLAYLGSHAL SGDFRTSVGR VKGLDARASR EIGDWFGAGP AALALGGEFR KEAFHQDIQD FAGNVQSLGV DPAATVSGER NLKAQYAELN VPVLDSLELS AAIRHDKYSD FGSTTNPKYS FRFQPFRQLV LRGAYSEGFR APSLYELYNP TFTTYTSANY DDPRLCAGGQ PSQGGIANRD CAQQFYNATG GNTDLRPETA RNVTLGLVYQ PLRDLSVGLD FWWIRIANQI AEFPEAAIFA DPQAYAGRIV RKADGSIDHV VTGLANLGKV KTSGVDLSLD YRFPASRYGQ FGLDLQGTYV SRYDFQQQIG GQYLDNVGDF QGVGVIARWK HVANATWSRD AWQATLSNRY TSGYNDYDRA SHGRVGSWNL WDLAGSYRLS HALGLTLGVK NLFDREPPFS NQTYTFQSGY DPRYTDPYGR ILFGRLSYSF
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