| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_37690 |
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| Symbol | |
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| ID | 4380315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3356866 |
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| End bp | 3359460 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639325597 |
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| Product | putative sensory box protein |
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| Protein accession | YP_791166 |
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| Protein GI | 116050020 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0535605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCTT CAGCGATTGC CAGCGGTACC GCAGTCTCCC AGGTCTCCAA GCATCTCCTA
ATGTTCCTGG CCGCCCTTTT CCTCGCCCTC GGTGCATGCG GCTGGGCGAT CCTGCACATC
GCCAGGCAGC AGGACGACAT CGCCATCGAG CAGAGCCATT TCTACGTGGA AAAGGCGCTG
CAGAATCGCC GGGAAAATTC CGAGCAGTTC TCCACCACCT ATTCGTTCTG GACCGACGCC
TACGTCTATC TGGGAAACCG GGTCGACGTG GACTGGGCCT TTACCAAGAA CAACCTCGGC
TCGGTGCTCT ACACCACCAA CGGCTACGAC GGCGTCTTCG TCATCGACGA CCGTGGCACT
CGCTACGCCA TGCTCGAGGG CGAGCTGTCC GAGCGCTCGC TGGCCGACTC GCTGGGCGCC
GATGCCGGAG ACATCCTCAG CGCCGCCCGC CGCGCCGCGG TGGACGAGGC GGCGATCAGC
CGCTACGTCG ACTTCGACGG CGCACCGGCG ATCCTGGTCG CCTCGGCGAT CAAGCCCACC
AGCGATCATG CGCCCATCGA CCTGGACAAG GCCTCGGTGA TGGTCTTCGT CGACCGGCTG
ACCCCGGCGA AGCTGGCCAA GCTCGGCGGC GACTACGGCA TCGCCAACCT GCACCTGTTG
GTCGGCGGCG CGGCGGGCGA CAAGGAAAGC CTGGCCCTGG AGGACACTCC CCATCGCCTG
GCCTGGGTGT CGTCGCGTCC GGGTAGCGCC ATGCTGCGGG AGACCGCGTT GCCGCTGCTG
GGGATCTTCG TGCTCGCCGC CGGGCTGCTG TTCTGGCTGA GCCGCAGCGC CGTGCTCAAC
GCCCGCGCGG TAGATCGCCA GCAGAAGGTC CTGAAACGCA GCAACCAGGC CCTGCTGGCC
AGCGAGGAAC GTTTCAAGTC GATAGCCGAG GCGGCCTCGG ACTGGATCTG GGAAGTCGAC
GGGCATTTCG TCTTCACCTA TCTCTCCGTG CGCTTCCGCG ACGTCACCGG CTACCAGCCG
GAGGCCTGGA TCGGGCGGCG GCTGGACGAG TTGCTGGATA GCGATACGGT GAACATCGTC
AAGTGGCTGG AAGGGCTGCC CGACGCCGAG ACGCCGTCCA GCCTGGTCTG CGCTTTCCGC
GACAGCCAGG GCCAGGCGCG GGTCGGCAAG CTGAGCGCCA GCGCGATCCG CAACGGCGTC
GCCAGCGGCT ATCGCGGCAC GGCGGCCGAT ATCACCGACG AGGTCGAAGC CCATGCGAAG
ATCCAGCATC TGTCCCTGCA CGATGCCCTG ACCGGCCTGC CGAACCGCAA CAAGCTGTTC
CAGTTCCTCG AACGCCTGCT GGCGGAAAAG GCTGGCAAGT CGCCGGTAGC GGTACTGATG
CTCGACCTCG ACCGCTTCAA GCCGATCAAC GACCAGCACG GCCATCCTGC CGGCGACGCG
GTGCTCTACG CCATCGCCGA GCGGCTGCGC GCCTCGACCC GCGACCAGGA CATGGTTGCC
CGGCTCGGCG GCGACGAGTT CGTGGTGGTC AGTACCCACG TGTCGTCGAA GCTGGAAACC
GAGAAGTTCT GTAGCCGGCT GATCGACGTG ATCAACCGCG AGATCGCCTA CGAAGGGCAC
AGCTTCCATG TCGGCGCCAG CATCGGCGTG GCCCTGGCGC CGGAGCACGG CGGCGATCCG
CGCGGCCTGC TGCGTTGCGC CGACGTGGCG ATGTACGAGG CCAAGGCCGC GGGGCGCAAT
ACCTGGCGTT TCTACTTGGA AGCGATGGAC TCCCATCTCG CCGAGAAGAA GCTGCGCGAG
ACCGAGTTGC GCGCCGCCTT GCAGAACGGC GAGTTCGAGT TGTACTACCA GCCGCGCTTC
CTGGCGCAGG AACAGACGAT CGCCTCGGCG GAGGCGCTGA TCCGCTGGAA CCATCCGCGC
CGCGGGCTGA TCGGCCCGGA CGAGTTCATC GGCCTGGCGG AAGAAAGCGA CCTGATCGTG
CAGATCGGCA ACTGGGTGCT GCGCGAGGCC TGCGCCACCG CCGCCTCCTG GCCGGGCGAG
GTGATGGTCT CGGTGAACGT GTCGCCGGCG CAGTTCATGA CCGGCGATAT CGTCTGGCAG
GTGCGCGAGG CGTTGCGCCT GGCCCACCTG GATGCCCGCC GGCTGGAGCT GGAGGTCACC
GAGAACGTCA TGCTCAACGA TGTCGACGGC GCGCTGCGGA CCATGACGGC CCTCAAGGAA
CTGGGCGTCC GCCTCAACAT GGACGACTTC GGTACCGGCT ATTCCTCGCT CGGCTACCTG
CGCACCTATC CCTTCGACAG CATCAAGATC GACAAGCGCT TCGTCGCCAG CATGGAGAAG
ACCGGGCGCG ACCGTTCGAT CGTGCAGGCC ATCATCAATC TCGGCAACGC CCTGAACCTG
CGGGTCACCG CCGAGGGGGT GGAGACCGAA GGGCAGATGC ATATCCTGCG CGACGAGCAA
TGCCACGAAC TGCAAGGATT CCTGCTCAGC CGGCCGCTGG ATGCGCAGGG CCTGCGCGAC
CTGCTGGCGC GCGAGGCGGG GCAGACCCAG GCGCCACAGG TTTCCGCCGA AGGCCATGCT
GCGCGCCGGC CTTGA
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| Protein sequence | MLASAIASGT AVSQVSKHLL MFLAALFLAL GACGWAILHI ARQQDDIAIE QSHFYVEKAL
QNRRENSEQF STTYSFWTDA YVYLGNRVDV DWAFTKNNLG SVLYTTNGYD GVFVIDDRGT
RYAMLEGELS ERSLADSLGA DAGDILSAAR RAAVDEAAIS RYVDFDGAPA ILVASAIKPT
SDHAPIDLDK ASVMVFVDRL TPAKLAKLGG DYGIANLHLL VGGAAGDKES LALEDTPHRL
AWVSSRPGSA MLRETALPLL GIFVLAAGLL FWLSRSAVLN ARAVDRQQKV LKRSNQALLA
SEERFKSIAE AASDWIWEVD GHFVFTYLSV RFRDVTGYQP EAWIGRRLDE LLDSDTVNIV
KWLEGLPDAE TPSSLVCAFR DSQGQARVGK LSASAIRNGV ASGYRGTAAD ITDEVEAHAK
IQHLSLHDAL TGLPNRNKLF QFLERLLAEK AGKSPVAVLM LDLDRFKPIN DQHGHPAGDA
VLYAIAERLR ASTRDQDMVA RLGGDEFVVV STHVSSKLET EKFCSRLIDV INREIAYEGH
SFHVGASIGV ALAPEHGGDP RGLLRCADVA MYEAKAAGRN TWRFYLEAMD SHLAEKKLRE
TELRAALQNG EFELYYQPRF LAQEQTIASA EALIRWNHPR RGLIGPDEFI GLAEESDLIV
QIGNWVLREA CATAASWPGE VMVSVNVSPA QFMTGDIVWQ VREALRLAHL DARRLELEVT
ENVMLNDVDG ALRTMTALKE LGVRLNMDDF GTGYSSLGYL RTYPFDSIKI DKRFVASMEK
TGRDRSIVQA IINLGNALNL RVTAEGVETE GQMHILRDEQ CHELQGFLLS RPLDAQGLRD
LLAREAGQTQ APQVSAEGHA ARRP
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