| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_37650 |
|---|
| Symbol | |
|---|
| ID | 4380319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 3351063 |
|---|
| End bp | 3352967 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639325593 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_791162 |
|---|
| Protein GI | 116050024 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.191863 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.545233 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTAT CGCGACTCAG CCTTGCCATC CTTTCCGTTC TCGCCGGTGC CCCGGCATTC
GCCGACGACA GCGGCGTCGA CCTCGACCAG GGCTGGAACC AGACCCAGAA GACCGCCTGG
CTGGAAGCCG GCCAGGGCTC GCGGATGCTG CCGCTGGCCT GGCTGGTGGC GCTGGAGCAG
CGCGCCAGCG AAGAACCGCT GATGTCCGAT GCGCTGATCC GCCAGTACGG CTATGTCCCG
CACACCCTCG GCGGTTCCAG CGTGAAGGTG GTGCAGGGCT ACGCGGTCGA CCGCAGCGAC
GACAGCGACC TGACCTTCAC CAAGCTGCGC TGGAAAGCCC TGCAGGGCTC CAAGGAACCC
TGGGTCGGAC CGACCTGCAG CATGTGCCAC ACCTCGCACA TCAGCTACCA GGGCACCCAG
TTGACCGTCT ACGGCGGGCA GACCATGGGC GACCTCGCCG GCTTCCAGCT GGAGATCCTC
GGCGCCCTGC AGAGCACCCG CGCCGACACC GCCAAGTTCG AGCGCTTCGC CCGCAAGGTG
CTCGGCGCCG ATGGCCTGGT CAGCGGCTAC AACGACGCCA ACAAGGCACG CCTGCAGGCA
GCCCTGGACG CCACCATCGT GCGCCTGCGC GACGGCTCGC ACTTCAACCT GCCGCACGAT
CCCGAGTTCG GCCCGGGCCG CCTGGACGCC ATCGGTTCGA TCTTCAACTC GGTGGGCTAC
GAACTGCACG CCGACGAGCA GATCTACGGC GCCGAGGACG CCCCCGTGAG CTATCCGTTC
CTGTGGAACG TACCGCAGCT GGACCGCGTG CAGTGGACCG GCTTCAACCC GAACCACATC
AACGTGGTCG ACATCGACAA CCGCAAGTTC GACGTCGGCG CCCTGGCGCG CAACGCCGGC
GAGGCGGTCG GGGTATTCGC CGACGTCAAG GTGCTCAGCC CGATCCAGTC GGCGCTGCAC
ATCGGCTACC CGTCGAGCAT CAACGTCGAC AACCTGATCC GCATCGAAGA CCAGCTCGGC
CAACTGAAGC CGCCGGCCTG GCCGAACCAG CTGTTCGGCG CCCCGGAGCC GACCAGGGTC
GCCGAGGGCC GCGAGCTGTA CCGGCAACAT TGCTCCAGCT GCCACACGCC GCTGGACCGC
AACGACCTGC GGACCCCGGT GAAGACCGTG CTCACCCACC TGCAGGCGCG CGGCGAGGTC
GCGCCGATCG GTACCGACCC GTGGACCGCC TGCAACAGCA TCGCCCAGCT GAAGACCGGC
TACGTGCGCG GCAAGCCCTA CCTGTCCTTC GTCGGCACTG GCCAGCGCGG TTTCTACGGC
AAGCAGGCCT ATGCGGTGGA CGTGCTCCAG GAAGTGGTGG TCCAGGCCCT GGCCGCGCGC
GGCCTGAGCG TCGCCCTGGG TGCCTTCCAG ACCGCCGCCC TGGGCATCTT CGACGGGCAG
TTGCCGCCGC TGATCAGTCC GGTGCCGGAC AGCCCCGACG CCGACAGCGT CGAAGCGACC
GCCGCGGACG CGCCAGGCGC CCTGCTCCTG GCCGAAAACG TCGCGGCCGA CAGCGACAAG
GCCCGGCGCC TGGAGCAGTG CCTGGCGATG ACCAGCGACC TGATGGCCTA CAAGGCGCGC
CCACTGAACG GTATCTGGGC CAGCCCGCCC TACCTGCACA ACGGCTCGGT GGCGACCCTC
TACGACCTGC TGCTGCCGCC GGACCTGCGG CCGCGCACCT TCTATACCGG CAGCGTCGAG
TTCGACCCGG TCAACGTCGG CTACATCACC GATGCCGGAG GCGCCAACCG CTTCCTCTTC
GACAGCGGCA AGCCGGGCAA CGCCAATGGC GGCCACGACT ACGGCAACGC GCAGTTCAAC
GAGCAGCAGC GCCGCGCCCT GGTCGAGTAC ATGAAGACCC TCTGA
|
|---|
| Protein sequence | MTLSRLSLAI LSVLAGAPAF ADDSGVDLDQ GWNQTQKTAW LEAGQGSRML PLAWLVALEQ
RASEEPLMSD ALIRQYGYVP HTLGGSSVKV VQGYAVDRSD DSDLTFTKLR WKALQGSKEP
WVGPTCSMCH TSHISYQGTQ LTVYGGQTMG DLAGFQLEIL GALQSTRADT AKFERFARKV
LGADGLVSGY NDANKARLQA ALDATIVRLR DGSHFNLPHD PEFGPGRLDA IGSIFNSVGY
ELHADEQIYG AEDAPVSYPF LWNVPQLDRV QWTGFNPNHI NVVDIDNRKF DVGALARNAG
EAVGVFADVK VLSPIQSALH IGYPSSINVD NLIRIEDQLG QLKPPAWPNQ LFGAPEPTRV
AEGRELYRQH CSSCHTPLDR NDLRTPVKTV LTHLQARGEV APIGTDPWTA CNSIAQLKTG
YVRGKPYLSF VGTGQRGFYG KQAYAVDVLQ EVVVQALAAR GLSVALGAFQ TAALGIFDGQ
LPPLISPVPD SPDADSVEAT AADAPGALLL AENVAADSDK ARRLEQCLAM TSDLMAYKAR
PLNGIWASPP YLHNGSVATL YDLLLPPDLR PRTFYTGSVE FDPVNVGYIT DAGGANRFLF
DSGKPGNANG GHDYGNAQFN EQQRRALVEY MKTL
|
|---|
| |