Gene PA14_37430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_37430 
Symbol 
ID4385787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3331556 
End bp3332065 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID639325577 
ProductRNA polymerase sigma factor 
Protein accessionYP_791146 
Protein GI116050040 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.031593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGCC AAGGCTCCAT CAAGAACACC CTGATCGCCC AGTTGTTCCA GCAGAACTAC 
GACTGGCTGT GCAAGAAACT GTCCTACCAG ACCGGCTGTA GCCACAGCGC CGAAGACCTC
GCCGCCGAAG CCTTCCTGCA GGTCTGGATG CTCCCCGACC CGGCGTCGAT CCGCTCGCCG
CGGGCGTTCC TCGCGACCAT CGCGCAACGC CTGATGTACG AGAGCTGGCG GCGCAAGGAC
CTGGAGCGCG CCTACCTGCA GATTCTCGCC GAGGCGCCGG AGGCGGTGCA GCCGTCGCCC
CACGAACAGT GGATGCTGAT CGAGAGCCTG CAAGCCATCG ACCGCCTGCT CGACGGCCTG
TCCGGGCAGG CCCGCGCGGT GTTCCTGATG AGCCAGCTGG AAGGCCTGAC CTACGTGCAG
ATCGGCGAAC GCCTCGGATT GTCCCTGGGG CGCATCCACC AGTTGATGAA GGATGCCTTG
CACTGCTGCT ACCGGGGATT CCAGGAATGA
 
Protein sequence
MDSQGSIKNT LIAQLFQQNY DWLCKKLSYQ TGCSHSAEDL AAEAFLQVWM LPDPASIRSP 
RAFLATIAQR LMYESWRRKD LERAYLQILA EAPEAVQPSP HEQWMLIESL QAIDRLLDGL
SGQARAVFLM SQLEGLTYVQ IGERLGLSLG RIHQLMKDAL HCCYRGFQE