| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_37340 |
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| Symbol | |
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| ID | 4385795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3322528 |
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| End bp | 3324300 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639325569 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_791138 |
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| Protein GI | 116050048 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000027158 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCA CGGTTGCCGA TCAATTGCTC GAACGCTTGA GCCAGTGGGG GGTGAAGCGC
GTCTTCGGCT ACCCCGGCGA TGGCATCAAC GGGATCATGG GCGCCATGGG CCGGCGCGCC
GAGGCATTCG ACTATATCCG CGTGCGCCAC GAGGAGATGG CGGCCTTCAT GGCCGGCGCC
CACGCCAAGT TCACCGGAGA GGTCGGGGTG TGCCTCGCCA CCTCGGGGCC GGGCGCGATC
CACCTGCTGA ACGGGCTCTA CGACGCGCGC ATGGATCATC AGCCGGTGCT GGCCATCGTC
GGCCAGCAGG CGGCTACCGC GTTGGGCAGC GACTACCAGC AGGAAGTCGA TCTGCAGAGC
TTGTTCAAGG ACGTTTCCGC CTATGTCGAG ACCGTGGTCA GCCCGGCACA ACTGCTCCAT
GTGCTGGACC GAGCCCTGCG CGTGGCGGTC GGCGAGCGGC AGGTGGCGAC GGTGATCGTG
CCCAACGACG TGCAACAGAT GGCGGCCCCG AAGCGCCAGC CCCACGAGCA CGGCCACGTG
ATGTCGGCGG TGGGCTTCGT CCAGCCGCGA CCCTACGCGC GCGACGCCGA CCTGGAAGCC
GCCGCGGCGA TCCTCAATCG CGGCCGGCGC GTGGCGATCC TCGCCGGTGC CGGGGCCCTG
GGCGCGCACC GGCAACTGGA AGCGGTCGCC GAGCGCCTGG CCGCCGGAGT GGCCAAGGCG
CTCCTGGGCA AGGCGGCGGT TTCCGACGAC CTGCCGTACG TGACCGGCTC CATCGGTCTG
CTCGGCACCC GCGCCAGCAG CATGCTGATG GAGCATTGCG ACACCCTGCT GATCGTCGGC
AGCACTTTCC CCTACAGCGA GTTCCTACCC AAGGCCGGCC AGGCGCGGGC GGTGCAGATC
GACCTGTATC CGCGCAACAT CGGTATCCGC TATCCGATCG ATCAGGCCTT GCTCGGCGAT
GCAGGGGAAA CCCTGGAGCG CCTGCTGCCG CTGCTCGAGC AGAAAAAGCA CGGCGCCTGG
CGCCGCCGGG TCGAGCGGGC GGTGACGGCC AGTCGCGAGG AAGCCCGGCG CCAGGCCGAA
GAGCCAGCCG ACCCGATCAA CCCGCAGCGG GTATTCCGTT CCTTGTCGGA GCAACTGCCG
GACGATGCGA TTCTCTGCGG CGACAGCGGC TCGCATACCA ACTGGTACGC CCGCGACATC
CGCATGCGCC CGGGCATGCT CGGCTCGCTG TCGGGCAAGC TGGCGACCAT GGGCAGCGGC
GTGCCCTACG CCATCGCCGC CAAGCTCGCC TATCCGCAGC GGCCGGTGGT GGCGATGGTC
GGCGACGGCG CCATGCAGAT GAACGGCAAC GCCGAACTGG TCACCGTGCA GCAGTACTGG
CAGCGCTGGG ACTCGCCGAC CTTCATCGTG CTGGTGCTGA ACAACGGCGA TCTCAACCAG
GTGACCTGGG AGCAGCGTGC CCTGGCCGGC GACCCGGAGT TCAGCCCGGC GCAGGAAGTG
ATCGATTTCC CCTACGCGCG TTATGCGGAC ATGCTCGGCT TCAAGGGCAT CCGCGTGGAT
CGCCCGGAGG ATATCGACGC CGCCTGGGCC GAGGCCTTCG CCGCCGACCG CCCGGTGTTG
CTGGAGGTGG TCACCGACCC GAACGTGCCG CCGCTGCCGC CGCACATCAG TTTCGAGCAG
GCCAAGCACC TGCTTGGCGC CATGCTGCAG GACGATCCCA AGCGCTGGGG GGTGATTCGC
CAGAGCGCCC GGCAGGTCCT CGCGCGGCAC TGA
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| Protein sequence | MSSTVADQLL ERLSQWGVKR VFGYPGDGIN GIMGAMGRRA EAFDYIRVRH EEMAAFMAGA
HAKFTGEVGV CLATSGPGAI HLLNGLYDAR MDHQPVLAIV GQQAATALGS DYQQEVDLQS
LFKDVSAYVE TVVSPAQLLH VLDRALRVAV GERQVATVIV PNDVQQMAAP KRQPHEHGHV
MSAVGFVQPR PYARDADLEA AAAILNRGRR VAILAGAGAL GAHRQLEAVA ERLAAGVAKA
LLGKAAVSDD LPYVTGSIGL LGTRASSMLM EHCDTLLIVG STFPYSEFLP KAGQARAVQI
DLYPRNIGIR YPIDQALLGD AGETLERLLP LLEQKKHGAW RRRVERAVTA SREEARRQAE
EPADPINPQR VFRSLSEQLP DDAILCGDSG SHTNWYARDI RMRPGMLGSL SGKLATMGSG
VPYAIAAKLA YPQRPVVAMV GDGAMQMNGN AELVTVQQYW QRWDSPTFIV LVLNNGDLNQ
VTWEQRALAG DPEFSPAQEV IDFPYARYAD MLGFKGIRVD RPEDIDAAWA EAFAADRPVL
LEVVTDPNVP PLPPHISFEQ AKHLLGAMLQ DDPKRWGVIR QSARQVLARH
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