Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_37140 |
Symbol | |
ID | 4385564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3309523 |
End bp | 3310428 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325556 |
Product | LysR family transcriptional regulator |
Protein accession | YP_791125 |
Protein GI | 116050061 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000373718 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGA ACTTGCAGCA GCTCGACCTC AACCTGCTTC TGGTCTTCGA TGCCCTGATG CGCGAACGCA ACCTGTCGCG CGCGGCGATC CGCCTGCATC GCAGCCAGCC GGCGGTGAGC AACGCCCTCG CCCGCCTGCG CGAACAGCTC GACCAGCCGC TGTTCCGGCG CACCGCCAAG GGCCTGGAAC CCACCGCCGC CGCCCTCGCC CTGTACGTGC CGGTGCGCCA GGCCCTGCAT CTGCTGCAGG CCGGCCTTGG CTCCCAGGAA ACCTTCGATC CGCACACTGC GCGGACCTTT CGCCTGACGA TGAACGACTA TGCCCAGTTG CGCCTGCTGC CGGGCCTGGT GACCCGCTTG AAGACCCTGG CCCCGCAGGT GACGCTGGAG GTGCGGCCCG ACGAAGGCGC CTCGATCCCG GCGCAGCTGG CCAGCGGCGA ACTCGACCTG GCGATCGACT ACCTGTACTT CGACGAGCCT GAGCTGGCCT ACCGGCCGGT CGGCGAGGAA CGCCTGGTGG TGATCGGCCG CCAGGGCCAT CCGGCCTTCC GCGGCGGCCT CGACCGCGCC GCCTACGAGG CCGCGCAGCA CGTCTCGATC CTGCCGCGGG TGGGGCGCGG CAGTCCGCTG GAGATCGTCC TCGGCTCGGC CAGGGTGCAG CGCCGGGTGC AATTGCTGGT GCCGCACTAC CTGACCATCC CGGCCATCGT CGCCAGCACC GAGCTGCTCG GCACCGTGCC GCGCCGCCTG GCCGAGCGTT TCGCCGGCAG CCATGGTCTG CAACTGGCGG ACGTCCCCTT CGAGATGGCC CCGGTGCAGG TCAACCTGAT CTGGCATCGC CAGCAGGAAG CGACGCCCGG CCTGCAATGG CTGCGCGAGC AGATCGTGCA GATCGAACAG GGCTGA
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Protein sequence | MKLNLQQLDL NLLLVFDALM RERNLSRAAI RLHRSQPAVS NALARLREQL DQPLFRRTAK GLEPTAAALA LYVPVRQALH LLQAGLGSQE TFDPHTARTF RLTMNDYAQL RLLPGLVTRL KTLAPQVTLE VRPDEGASIP AQLASGELDL AIDYLYFDEP ELAYRPVGEE RLVVIGRQGH PAFRGGLDRA AYEAAQHVSI LPRVGRGSPL EIVLGSARVQ RRVQLLVPHY LTIPAIVAST ELLGTVPRRL AERFAGSHGL QLADVPFEMA PVQVNLIWHR QQEATPGLQW LREQIVQIEQ G
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