Gene PA14_37140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_37140 
Symbol 
ID4385564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3309523 
End bp3310428 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content70% 
IMG OID639325556 
ProductLysR family transcriptional regulator 
Protein accessionYP_791125 
Protein GI116050061 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000373718 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGA ACTTGCAGCA GCTCGACCTC AACCTGCTTC TGGTCTTCGA TGCCCTGATG 
CGCGAACGCA ACCTGTCGCG CGCGGCGATC CGCCTGCATC GCAGCCAGCC GGCGGTGAGC
AACGCCCTCG CCCGCCTGCG CGAACAGCTC GACCAGCCGC TGTTCCGGCG CACCGCCAAG
GGCCTGGAAC CCACCGCCGC CGCCCTCGCC CTGTACGTGC CGGTGCGCCA GGCCCTGCAT
CTGCTGCAGG CCGGCCTTGG CTCCCAGGAA ACCTTCGATC CGCACACTGC GCGGACCTTT
CGCCTGACGA TGAACGACTA TGCCCAGTTG CGCCTGCTGC CGGGCCTGGT GACCCGCTTG
AAGACCCTGG CCCCGCAGGT GACGCTGGAG GTGCGGCCCG ACGAAGGCGC CTCGATCCCG
GCGCAGCTGG CCAGCGGCGA ACTCGACCTG GCGATCGACT ACCTGTACTT CGACGAGCCT
GAGCTGGCCT ACCGGCCGGT CGGCGAGGAA CGCCTGGTGG TGATCGGCCG CCAGGGCCAT
CCGGCCTTCC GCGGCGGCCT CGACCGCGCC GCCTACGAGG CCGCGCAGCA CGTCTCGATC
CTGCCGCGGG TGGGGCGCGG CAGTCCGCTG GAGATCGTCC TCGGCTCGGC CAGGGTGCAG
CGCCGGGTGC AATTGCTGGT GCCGCACTAC CTGACCATCC CGGCCATCGT CGCCAGCACC
GAGCTGCTCG GCACCGTGCC GCGCCGCCTG GCCGAGCGTT TCGCCGGCAG CCATGGTCTG
CAACTGGCGG ACGTCCCCTT CGAGATGGCC CCGGTGCAGG TCAACCTGAT CTGGCATCGC
CAGCAGGAAG CGACGCCCGG CCTGCAATGG CTGCGCGAGC AGATCGTGCA GATCGAACAG
GGCTGA
 
Protein sequence
MKLNLQQLDL NLLLVFDALM RERNLSRAAI RLHRSQPAVS NALARLREQL DQPLFRRTAK 
GLEPTAAALA LYVPVRQALH LLQAGLGSQE TFDPHTARTF RLTMNDYAQL RLLPGLVTRL
KTLAPQVTLE VRPDEGASIP AQLASGELDL AIDYLYFDEP ELAYRPVGEE RLVVIGRQGH
PAFRGGLDRA AYEAAQHVSI LPRVGRGSPL EIVLGSARVQ RRVQLLVPHY LTIPAIVAST
ELLGTVPRRL AERFAGSHGL QLADVPFEMA PVQVNLIWHR QQEATPGLQW LREQIVQIEQ
G