| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_37100 |
|---|
| Symbol | |
|---|
| ID | 4385567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3305550 |
|---|
| End bp | 3307187 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639325553 |
|---|
| Product | putative dehydrogenase |
|---|
| Protein accession | YP_791122 |
|---|
| Protein GI | 116050064 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCAAC CCGAAAACCC GGCGCGCCGC ACCTTGCTGG CGCAGACCGT CGCCGGCTCC
GCCGCGCTCG CCCTGGGCTC GCTGCTCGGC GGCGCGCCCG GCGTGGCCAG CGCCACGGCG
GAAACGCCCC GCAAGGCCTT CGATGGCGGC AGGATCGATG TGCTGATCGT CGGCGGCGGC
TCCGCCGGCG CGGTCCTCGC CCGGCGCCTG AGCGAGCGCG GCGACCGCCG GGTACTGTTG
CTGGAAGCCG GCCAGGCCTA TCCGGCCTGG GACTACCCCA GGATCATCGC CAGCAGCGAC
AGCGTCGGCG GCGACCCCGC CAGCGACTGG GGCTACCAGT CCCAACCGGG GGCGATCGGG
CATCCGATCC ATGCGATCCG CGGCAAGGTC CTCGGCGGCA GCTCGGCGAT CAACGGCGCG
GTGGCGATCC GCGCGCGGCG CGAAGACTTC GCCCGCTGGA ACCTGCCGGG CTGGTCCTAC
GACGACCTGC TGCCGGCGTT CCGCCGCCTG GAGACCCGCC AGGGCGGCGA CCCGGCCCTG
CACGGCGGGG ACGGACCGCT GCCGGTGCGG CAACTGAGCC GCGCCGATCT CTCGCCGATG
CAGAGGGCCT TCGTCGACGC CACCCTGGCC AACGGTTTCA AGGCCATCGT CGATTTCGAC
GGCGCCGACG CCAACGGCGT CGGGCCGTAC CCGATGAATG TCGTCAACGG TGTGCGCGTC
AACACCGGCA TGGCCTATCT CGACAACGCC GTGCGCGGCC GCGCCAACCT GTCGATCCGC
GGCGACGCGC TGGTCGACCG GGTGCTCTTC GAAGGTAAGC GCGCGGTGGG CGTGCGCCTG
GCCTCCGGCG AGGAAATCCA CGCCGGCGAA GTGATCCTCA GCGCCGGCGC CTACGGCAGC
CCGGCGATCC TGCTGCGCTC CGGTGTCGGC CCGGCCGACG AGCTGAAGGC GCTGTCGATC
CCGTTGCTTG CCGACTTGCC GGTGGGCCGC CGGCTCAAGG ACCATCCGTT CTACTACAAC
GCCTATGCCG CCCGGCCGGA GCGCATCGGC GCGCAGTCGC CGGTGATCGG CGCCAAGCTC
TGGACCCATA GCTCGCGGGC GCAGAACGGC GAGCTGGACC TGCACATCAC CGCCACCCAC
CTGTTCCCCG CCGAGATGAG CCCGACCGGG GTCGGCTTCG TCCTCGCCGT GGCCCTGACC
CGGCCGCAAT CGCTGGGCAG TGTGCGCCTG GCCAGCCGCG ACCCGGCCGT CGCGCCGCTG
ATCGACCTGA ACTTCCTCGC CGAGGCCGAA GACCGCGCGC GGTTGCTGGA AGGGGTCAAG
CTGGCGCGCC GGATCGGCCG CAGCGAACCG CTCGCCGGGC TGATCCACGC CGAACTCGGA
CCAGGGCCCG AGGCACGCAG CGATGCGCAG ATCGAAGCGG CGATCCGCGC CACCCTCGAT
ACCTACCACC ACCCGACCTC CAGCGCGCCG ATGGGCCGCG CCGGCGAGCG CTGGGCGGTG
GTCGACCTGG AGGGCAGGGT GCATGGCCTG CAAGGATTGC GGGTGATCGA CGCCTCGATC
TTCCCCGATG CCATTTCGGT GGCCACCAAC ATCACCACCA TCGCCGTTGC CGAGCACCTC
GCGCAGCACA TCGCCTGA
|
|---|
| Protein sequence | MHQPENPARR TLLAQTVAGS AALALGSLLG GAPGVASATA ETPRKAFDGG RIDVLIVGGG
SAGAVLARRL SERGDRRVLL LEAGQAYPAW DYPRIIASSD SVGGDPASDW GYQSQPGAIG
HPIHAIRGKV LGGSSAINGA VAIRARREDF ARWNLPGWSY DDLLPAFRRL ETRQGGDPAL
HGGDGPLPVR QLSRADLSPM QRAFVDATLA NGFKAIVDFD GADANGVGPY PMNVVNGVRV
NTGMAYLDNA VRGRANLSIR GDALVDRVLF EGKRAVGVRL ASGEEIHAGE VILSAGAYGS
PAILLRSGVG PADELKALSI PLLADLPVGR RLKDHPFYYN AYAARPERIG AQSPVIGAKL
WTHSSRAQNG ELDLHITATH LFPAEMSPTG VGFVLAVALT RPQSLGSVRL ASRDPAVAPL
IDLNFLAEAE DRARLLEGVK LARRIGRSEP LAGLIHAELG PGPEARSDAQ IEAAIRATLD
TYHHPTSSAP MGRAGERWAV VDLEGRVHGL QGLRVIDASI FPDAISVATN ITTIAVAEHL
AQHIA
|
|---|
| |