| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_37030 |
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| Symbol | cupA3 |
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| ID | 4385573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3296915 |
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| End bp | 3299533 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639325547 |
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| Product | usher |
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| Protein accession | YP_791116 |
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| Protein GI | 116050070 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.302573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTATC GCCATGAACG CCGCTGCCGC ACCGGCACGG CCCTGATGGC GGGCGGCATG
GCGCTGGCGG CGAGCGCCTT CGGTCATGCC CAGCCCGGCT ACGAATTCGA TGATCGCCTG
TTGCTCGGCT CTTCCCTGGG CGGCGGCGAC CTGTCGCGCT TCAACCAGGA CGGTCGGATC
GATCCGGGTC GCTATCACGT GGATGTCTAC CTCAACGAGC GCTTCGCCAG CCGCAGCGAA
GTGAGTTTCC GCGCCAACCC CGCCAGCGGC GCGGTGGAGC CCTGCCTCGA CGAAGACTTC
CTGCGCCAGC GCCTCGGCGC CAAGCCTGGT GACGATCCGC GCAAGAGCGG CGACGGGCGC
CACTGCGCCT TTCTCGGTGC ACGCCTGCCC GGCTCGCGGT TCAGCCTGGA CGTCGCCCGC
CTGCGCCTGG ATCTCTCGGT GCCGCAAGCC TTGCTCGACC TCAAGCCGCG CGGCTACGTC
AGCCCCGAGG AGTGGGACGC CGGCGACAGC ATGGGCTTCG TCAACTACGA CACCAACCTC
TATCGCTCCG AATACCGCGG CGGCGAATCG GGACGATCGG ACTACGCCTA TGTCGGCCTG
AACAGCGGCA TCAACCTCGG CCTGTGGCGT TTGCGCCACC AGTCCAACTA CACCTATTCC
CGCTACAACG GGCAGGCCAG GCGCAAGTGG AACGGCATCC GCACCTATGC CCAGCGCGCC
TTGCCGGCCT GGCGCAGCGA ACTGACGGCG GGGGAGAGCT ACACCGCCGG CAACCTGCTC
GGCAGCATCG GCTACCGCGG CCTGAGCCTG GCCACCGACG ACCGCATGCT GCCCGAGTCC
CTGCGCCGCT ATGCGCCGCA GGTGCGCGGC ACAGCGGCCA CCGCGGCGCG GGTGGTGATC
AGCCAGAACG GCAGGAAGAT CCGCGAGGTG AATGTCGCCC CCGGTCCGTT CGTCATCGAC
GATCTCTACG ACAGCGCCTA TGCCGGCGAT CTGGATGTCC AGGTGTTCGA AGCCGATGGC
AGCGTATCGA GCTTCAGCGT GCCGTTCGCC TCGGTCCCGG AGTCCATGCG TCCCGGCCTG
TCGCGCTACA GCTTCACCCT GGGCCAGGCG CGCCAGTACG GCGACGGCGA CGACCTGTTC
GCCGACTTCA CCTACCAGCG CGGCATGAGC AACGCCCTGA CCGCCAACCT GGGACTGCGT
GTCGCCGACG ACTACCTGGC CATGCTGGGC GGCGGCGTCC TCGCCACCCG CTTCGGCGCC
TTCGGCCTGA ACAGCACCTA TTCCAGCGCA CGCGTCGAGG ATGGCGCGCG CAAGCAGGGC
TGGCGCATCG GGCTCGACTA CAGCCGGACC TTCCAGCCCA CCGGCACTAC CCTGACCCTG
GCCGGCTACC GCTATTCCAC CGAAGGCTAC CGCGAACTCG GCGACGTGCT CGGCTCGCGC
GACGCACTGC GCCACGGGGA CACCTGGGAT TCCGGCAGCT ACAAGCAGCG CAACCAGTTC
AACCTGCTGG TGAGCCAGGC CCTCGGCGGT TACGGCAACC TCTATCTTTC CGGCTCCTCC
AGCGATTTCT ACGACGGCAA GAGCCGCGAC ACCCAATTGC AGTTCGGCTA CTCCAACACC
TGGGGGCAGT TGAGCTACAA CCTCGCCTGG TCGCGGCAGA CCACCACCTA CTACCAGGAG
CAGGGCGACC AGGACCCTGG CGTCGAGCTG CTCCGGCGCG ACCGGCGCAG CGGCCAGCGC
AACGACACCC TGACCCTCAG CGTCTCCATG CCGCTGGGTT CTTCCAGTCG GGCGCCGACG
CTCAGCGCCA TGGCTACCCG GCGCTCCGGC GACAGCCGTG GCGGCAGCCT GCAAACCGGG
CTGAACGGTA CGCTGGGCGA CGAGCGTACC TGGAGCTACG CGCTGTCCGC CAACCGCGAC
AGCGAGGTCG CCGACACCAC CTGGAACGGC ACGTTGCAGA AGCAGGCGGC GCTGGCCACC
GTGAATGCCG GCTATGCCCA GGGCGATCGC TACCGGCAAT ACAGCGGCGG CATCCGTGGC
GCGCTGGTCG CCCACCGCGA CGGGCTGACC CTGGGCCCCA GCGTCGGCGA TACCTTCGCC
CTGGTCGAGG CCAAGGGCGC CAGCGGTGCC GCGATACGCG GCGGGCAGGG CGCGCGCATC
GACGGCAACG GCTATGCGCT GGCTCCCTCG CTGTCGCCCT ATCGCTACAA CCCGATCTCC
CTCGATCCCG TTGGCATCGA TCCCGACGCC GAACTGCTGG AAACCGAGCG CAAGGTCGCG
CCCTACGCCG GTGCCAGCGT GCGCGTGACG TTCAGGACGC TGACCGGCCA TCCGCTGCTG
ATCCAGGCGC GGCGCGAGGA CGGCAGTGTG CTGCCGCTCG GCGCCGTGGT GGTCGACGAC
GGCGGGGCGG CCATCGGCAT GGTCGGGCAG GGCGGCCAGG TCTATGCGCG CGCGGAAAAC
CAGCGGGGCA GGTTGCTGGT GCAATGGGGA ACGGCACGGC AGGAGCGTTG CGAGCTGCCC
TACGACCTGG CCGGCGCGCC CCGCGACCAG GTGCTGATCC GCCTGCGCGG CACCTGCCGG
GCAGCCGCCA TCGATTCCAA CCCGGAGACC GCCAGATGA
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| Protein sequence | MTYRHERRCR TGTALMAGGM ALAASAFGHA QPGYEFDDRL LLGSSLGGGD LSRFNQDGRI
DPGRYHVDVY LNERFASRSE VSFRANPASG AVEPCLDEDF LRQRLGAKPG DDPRKSGDGR
HCAFLGARLP GSRFSLDVAR LRLDLSVPQA LLDLKPRGYV SPEEWDAGDS MGFVNYDTNL
YRSEYRGGES GRSDYAYVGL NSGINLGLWR LRHQSNYTYS RYNGQARRKW NGIRTYAQRA
LPAWRSELTA GESYTAGNLL GSIGYRGLSL ATDDRMLPES LRRYAPQVRG TAATAARVVI
SQNGRKIREV NVAPGPFVID DLYDSAYAGD LDVQVFEADG SVSSFSVPFA SVPESMRPGL
SRYSFTLGQA RQYGDGDDLF ADFTYQRGMS NALTANLGLR VADDYLAMLG GGVLATRFGA
FGLNSTYSSA RVEDGARKQG WRIGLDYSRT FQPTGTTLTL AGYRYSTEGY RELGDVLGSR
DALRHGDTWD SGSYKQRNQF NLLVSQALGG YGNLYLSGSS SDFYDGKSRD TQLQFGYSNT
WGQLSYNLAW SRQTTTYYQE QGDQDPGVEL LRRDRRSGQR NDTLTLSVSM PLGSSSRAPT
LSAMATRRSG DSRGGSLQTG LNGTLGDERT WSYALSANRD SEVADTTWNG TLQKQAALAT
VNAGYAQGDR YRQYSGGIRG ALVAHRDGLT LGPSVGDTFA LVEAKGASGA AIRGGQGARI
DGNGYALAPS LSPYRYNPIS LDPVGIDPDA ELLETERKVA PYAGASVRVT FRTLTGHPLL
IQARREDGSV LPLGAVVVDD GGAAIGMVGQ GGQVYARAEN QRGRLLVQWG TARQERCELP
YDLAGAPRDQ VLIRLRGTCR AAAIDSNPET AR
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