| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_36960 |
|---|
| Symbol | |
|---|
| ID | 4385764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3291942 |
|---|
| End bp | 3293306 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639325542 |
|---|
| Product | putative transporter |
|---|
| Protein accession | YP_791111 |
|---|
| Protein GI | 116050075 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.625035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCA GCCTGTGGTT GCTGGTACTG GGCTGCATCC TGCTGACGCT CGGCCTGGCC
TCGGCCTACC TGCGCCTGCT GCCGGTCAGC ACCTCGTTCC TCTACCTGCT GTTCGGCCTG
GCCATCGGCC CGGCCGGGCT GCATGCCTGG CGCAGTGGCC TGGCGGACAT CAGCGGCTGG
TTCGAACACC TCGCCGAGGC GGCCCTGCTG ATCTCGCTGT TCATCGGCGG CCTCAAGCTG
CGCCTGCCGC TGCGCTCGCC GGCCTGGACC GCCGCCTGGC TGCTGGCCGG ACCGGTCCTG
CTCGGCTGTA TCCTCGGCCT TACCCTGGGC GCGCATTTCC TGTTCGGCCT GGACTGGGGG
CTGGCCTTGC TGGTCGCGGC GATCCTCGCG CCCACCGACC CGGTGCTGGC CAGCGACATC
CAGGTCAACC ACGCCGGCGA CGACGATCGC CTGCGCTACG CCGTATCCGG CGAGGCGGGA
CTCAACGACG GCATCGCCTT TCCCTTCGTC ATCGCCGCCC TGCTGCTGAT CGGTCAGGGC
GGCGGCCTGC CTGGCGAGTT CGACCGCAGC GGCCTGGACT GGCTGCTGCG CGACGTCCTC
TGGGCCATCC CCGCCGGATT GCTGGTGGGC TATTGCCTGG GCCATGGCCT CGGCCGCCTG
GCCATCCACC TGCGGGCGCG GCACACCGAC ACCTCGGTGT CGGCCAACGA CTTCCTCGCC
CTGGCGCTGA TCGCGCTGTC CTATGTCGGC GCCGACGCGC TGGGCGGCTG GGGCTTCCTC
GCCAGCTTCG CCGCCGGGAT CGGCCTGCGC CACGCCGAGG TGGCGACGCT GGGACACGCC
TCGGCACCGG CCGAGGCGCA GGCGGCCGCC GCCGACGTGC GCGAGGCCGG GCAGGCCAGC
GGCGCCATCG AGTATGGCGC CGACCGCAGC GAACACCCGA AGGTGGCGGC CGGCGCGGTG
ATGCTCGACG TGCTCTCCTT CGGCAACCTG CTGGAGCGCT CGCTGGAAGT GCTGCTGGTG
ACCCTGCTCG GCGCCATGCT CTACCAGCAC TGGGACTGGC GCGCGCTGCC GCTGGCGCTG
CTGCTGTTCT GCGTGTGCCG GCCGGCGATG GTCTGGCTGC TGGTCGGCCG GCGGCTGATG
CACCCGGCGC AGCGGCGCCT GCTCGGCTGG TTCGGCATCC GCGGCATCGG CAGCCTGTAC
TACCTCAGCT ACGCGCTGAA CCAGGGGCTG CCTACGGCGC TCGCGCATAC CGCCAGCGAC
CTGGTGCTGA GCCTCGTCGC CCTGAGCATC TGCGTGCACG GCCTGAGCAT CCAGCCGCTG
CTGATGCGCC ACGCGCGCAG CGTCAGTCGC CGCGATCGGG AATGA
|
|---|
| Protein sequence | MSFSLWLLVL GCILLTLGLA SAYLRLLPVS TSFLYLLFGL AIGPAGLHAW RSGLADISGW
FEHLAEAALL ISLFIGGLKL RLPLRSPAWT AAWLLAGPVL LGCILGLTLG AHFLFGLDWG
LALLVAAILA PTDPVLASDI QVNHAGDDDR LRYAVSGEAG LNDGIAFPFV IAALLLIGQG
GGLPGEFDRS GLDWLLRDVL WAIPAGLLVG YCLGHGLGRL AIHLRARHTD TSVSANDFLA
LALIALSYVG ADALGGWGFL ASFAAGIGLR HAEVATLGHA SAPAEAQAAA ADVREAGQAS
GAIEYGADRS EHPKVAAGAV MLDVLSFGNL LERSLEVLLV TLLGAMLYQH WDWRALPLAL
LLFCVCRPAM VWLLVGRRLM HPAQRRLLGW FGIRGIGSLY YLSYALNQGL PTALAHTASD
LVLSLVALSI CVHGLSIQPL LMRHARSVSR RDRE
|
|---|
| |