Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_36580 |
Symbol | |
ID | 4382233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3255048 |
End bp | 3256799 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325510 |
Product | putative glycosyl hydrolase |
Protein accession | YP_791079 |
Protein GI | 116050106 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0581511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.753137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATCC GGCGCCGCTT CGGCGCCCAG TTCCAAGGCA ACGGCCGAAC CTGCTTCGGC CTCTGGGCTC CGGACGCCCG CGAGGTCCGG GTCGAGACCG CCGACGGCCG CGACTGGCCG CTGGAAGGCA GCGACAGCGG CTGGTTCGAG GCGACCCTGC CCTGTCCGCC CGGCACCCGC TACCGCTACC GCATCGATGG CCGCCCCGGG GTGCCGGACC CGGCCTCGCA GTTCCAGCCC GACGGCGTGC ATGGCCACAG CCAGGTGCTG GACCATGACG CCTACGCCTG GCGCGTCGAC GAGTGGCGCG GGCGGCCTTG GCACGAAGCG GTGATCTACG AGCTGCACGT CGGCCTGTTC GGCTCCTACG CCGAGGTCGA GGGCTTCCTT CCGCGCCTGG TGGAACTGGG CGTGACCGCC GTGGAGCTGA TGCCGCTGGG CGAGTTTCCC GGTCGCCGCA ACTGGGGCTA CGACGGCGTG CTGCCGTTCG CCCCGGCGTC GGCCTACGGC ACGCCCGAGC AACTCAAGCA TCTGATCGAC AGCGCTCACG GCATGGGCCT GATGGTCTTC GTCGACGTGA TCTACAACCA CTTCGGCCCG GACGGCAACT ACCTCGCCCA GTACGCCGCC GCGTTCTTCC GCGACGACCG GCAGACGCCC TGGGGCCAGG CCATCGATTT CCGTCGCGGC GAAGTCCGCG AGTTCTTCTA TGAGAACGCC CTGATGTGGC TGCTCGACTA TCGCGTCGAC GGCCTGCGCT TCGATGCCGT GCACGCGATT CCCGATAGCG CGTTCCTCGT CGAGATGGCC CGCCGCCTGC GCGGCGCCGC CGGCCCCGAG CGCCATGTGC ACCTGGTCCT GGAGAACGAC GACAACCGCG CCAGCCTGCT GCGCCAGGGC TACGACGCAC AGTGGAACGA CGATGGCCAC CATGCGCTGC ACGTCCTGCT CACCGGCGAG AGCGACGGCT ACTACCAGGA CTACCCCGAG CCGCTGCGGT GCCTGGCGCG CTGCCTGGCC GAAGGCTTCG TCTACCAGGG CGAAGCCAAC CGCCACGGCC GGCCGCGCGG CGAACCGAGT GCCGACCTGG CGCCGGACGC CTTCGTGCTG TTCCTGCAAA ACCACGACCA GGTCGGCAAC CGCGCCTTCG GCGAGCGTCT CAGCGTTCTC GCCGAACCCC AGGCGTTGCG CCTGGCGATA GCGCTGCAAC TGCTCGCGCC GATGATCCCG CTGCTGTTCA TGGGCGAGGA ATGCGCCGCG CGCGAACCGT TCCTGTATTT CACCGATCAC CAGGGCGAAC TGGCGGACGC GGTCCGCGAG GGACGACGCA AGGAGTTCGG CGAGTTCGGC CGCTTCGGCG AGGGCGCCAC CCTGGCTTCG CTCCCCGATC CCAACGCGGT GGAGGCCTTC GAGCGCTCGC GTCCCGGCCT GGCCGATTGC GACCCGGCCT GGCGCGGCTT CTACCGGCAA CTGCTGGAAA TCCGTCACGA ACACCTGATC CCGCGCCTGC GCGGCGCCCG TTCGCTGGGC GTGACCACCA TCGCCGGCGC CGCGCTGTCG GCGCGCTGGC GACTCGGTGA CGGCAGTGAC TGGCGAATCG ACTTCAACCC TTCTCCGCTC GAAGCGGAAG TCGAGCCGCC GGCGGCCGCC ACCCAGGTGC TGTTCCTCGA CAACCTCGCC TGTGCCGAGT ATCGCCGCGG CCGCCTAAGT CCCCGCAGCA TCGCGGTCAG CCTGGAGCCC GCCCATGAGT GA
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Protein sequence | MAIRRRFGAQ FQGNGRTCFG LWAPDAREVR VETADGRDWP LEGSDSGWFE ATLPCPPGTR YRYRIDGRPG VPDPASQFQP DGVHGHSQVL DHDAYAWRVD EWRGRPWHEA VIYELHVGLF GSYAEVEGFL PRLVELGVTA VELMPLGEFP GRRNWGYDGV LPFAPASAYG TPEQLKHLID SAHGMGLMVF VDVIYNHFGP DGNYLAQYAA AFFRDDRQTP WGQAIDFRRG EVREFFYENA LMWLLDYRVD GLRFDAVHAI PDSAFLVEMA RRLRGAAGPE RHVHLVLEND DNRASLLRQG YDAQWNDDGH HALHVLLTGE SDGYYQDYPE PLRCLARCLA EGFVYQGEAN RHGRPRGEPS ADLAPDAFVL FLQNHDQVGN RAFGERLSVL AEPQALRLAI ALQLLAPMIP LLFMGEECAA REPFLYFTDH QGELADAVRE GRRKEFGEFG RFGEGATLAS LPDPNAVEAF ERSRPGLADC DPAWRGFYRQ LLEIRHEHLI PRLRGARSLG VTTIAGAALS ARWRLGDGSD WRIDFNPSPL EAEVEPPAAA TQVLFLDNLA CAEYRRGRLS PRSIAVSLEP AHE
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