Gene PA14_36580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_36580 
Symbol 
ID4382233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3255048 
End bp3256799 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content70% 
IMG OID639325510 
Productputative glycosyl hydrolase 
Protein accessionYP_791079 
Protein GI116050106 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0296] 1,4-alpha-glucan branching enzyme 
TIGRFAM ID[TIGR02402] malto-oligosyltrehalose trehalohydrolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0581511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.753137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCC GGCGCCGCTT CGGCGCCCAG TTCCAAGGCA ACGGCCGAAC CTGCTTCGGC 
CTCTGGGCTC CGGACGCCCG CGAGGTCCGG GTCGAGACCG CCGACGGCCG CGACTGGCCG
CTGGAAGGCA GCGACAGCGG CTGGTTCGAG GCGACCCTGC CCTGTCCGCC CGGCACCCGC
TACCGCTACC GCATCGATGG CCGCCCCGGG GTGCCGGACC CGGCCTCGCA GTTCCAGCCC
GACGGCGTGC ATGGCCACAG CCAGGTGCTG GACCATGACG CCTACGCCTG GCGCGTCGAC
GAGTGGCGCG GGCGGCCTTG GCACGAAGCG GTGATCTACG AGCTGCACGT CGGCCTGTTC
GGCTCCTACG CCGAGGTCGA GGGCTTCCTT CCGCGCCTGG TGGAACTGGG CGTGACCGCC
GTGGAGCTGA TGCCGCTGGG CGAGTTTCCC GGTCGCCGCA ACTGGGGCTA CGACGGCGTG
CTGCCGTTCG CCCCGGCGTC GGCCTACGGC ACGCCCGAGC AACTCAAGCA TCTGATCGAC
AGCGCTCACG GCATGGGCCT GATGGTCTTC GTCGACGTGA TCTACAACCA CTTCGGCCCG
GACGGCAACT ACCTCGCCCA GTACGCCGCC GCGTTCTTCC GCGACGACCG GCAGACGCCC
TGGGGCCAGG CCATCGATTT CCGTCGCGGC GAAGTCCGCG AGTTCTTCTA TGAGAACGCC
CTGATGTGGC TGCTCGACTA TCGCGTCGAC GGCCTGCGCT TCGATGCCGT GCACGCGATT
CCCGATAGCG CGTTCCTCGT CGAGATGGCC CGCCGCCTGC GCGGCGCCGC CGGCCCCGAG
CGCCATGTGC ACCTGGTCCT GGAGAACGAC GACAACCGCG CCAGCCTGCT GCGCCAGGGC
TACGACGCAC AGTGGAACGA CGATGGCCAC CATGCGCTGC ACGTCCTGCT CACCGGCGAG
AGCGACGGCT ACTACCAGGA CTACCCCGAG CCGCTGCGGT GCCTGGCGCG CTGCCTGGCC
GAAGGCTTCG TCTACCAGGG CGAAGCCAAC CGCCACGGCC GGCCGCGCGG CGAACCGAGT
GCCGACCTGG CGCCGGACGC CTTCGTGCTG TTCCTGCAAA ACCACGACCA GGTCGGCAAC
CGCGCCTTCG GCGAGCGTCT CAGCGTTCTC GCCGAACCCC AGGCGTTGCG CCTGGCGATA
GCGCTGCAAC TGCTCGCGCC GATGATCCCG CTGCTGTTCA TGGGCGAGGA ATGCGCCGCG
CGCGAACCGT TCCTGTATTT CACCGATCAC CAGGGCGAAC TGGCGGACGC GGTCCGCGAG
GGACGACGCA AGGAGTTCGG CGAGTTCGGC CGCTTCGGCG AGGGCGCCAC CCTGGCTTCG
CTCCCCGATC CCAACGCGGT GGAGGCCTTC GAGCGCTCGC GTCCCGGCCT GGCCGATTGC
GACCCGGCCT GGCGCGGCTT CTACCGGCAA CTGCTGGAAA TCCGTCACGA ACACCTGATC
CCGCGCCTGC GCGGCGCCCG TTCGCTGGGC GTGACCACCA TCGCCGGCGC CGCGCTGTCG
GCGCGCTGGC GACTCGGTGA CGGCAGTGAC TGGCGAATCG ACTTCAACCC TTCTCCGCTC
GAAGCGGAAG TCGAGCCGCC GGCGGCCGCC ACCCAGGTGC TGTTCCTCGA CAACCTCGCC
TGTGCCGAGT ATCGCCGCGG CCGCCTAAGT CCCCGCAGCA TCGCGGTCAG CCTGGAGCCC
GCCCATGAGT GA
 
Protein sequence
MAIRRRFGAQ FQGNGRTCFG LWAPDAREVR VETADGRDWP LEGSDSGWFE ATLPCPPGTR 
YRYRIDGRPG VPDPASQFQP DGVHGHSQVL DHDAYAWRVD EWRGRPWHEA VIYELHVGLF
GSYAEVEGFL PRLVELGVTA VELMPLGEFP GRRNWGYDGV LPFAPASAYG TPEQLKHLID
SAHGMGLMVF VDVIYNHFGP DGNYLAQYAA AFFRDDRQTP WGQAIDFRRG EVREFFYENA
LMWLLDYRVD GLRFDAVHAI PDSAFLVEMA RRLRGAAGPE RHVHLVLEND DNRASLLRQG
YDAQWNDDGH HALHVLLTGE SDGYYQDYPE PLRCLARCLA EGFVYQGEAN RHGRPRGEPS
ADLAPDAFVL FLQNHDQVGN RAFGERLSVL AEPQALRLAI ALQLLAPMIP LLFMGEECAA
REPFLYFTDH QGELADAVRE GRRKEFGEFG RFGEGATLAS LPDPNAVEAF ERSRPGLADC
DPAWRGFYRQ LLEIRHEHLI PRLRGARSLG VTTIAGAALS ARWRLGDGSD WRIDFNPSPL
EAEVEPPAAA TQVLFLDNLA CAEYRRGRLS PRSIAVSLEP AHE