| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_36300 |
|---|
| Symbol | |
|---|
| ID | 4384797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3232682 |
|---|
| End bp | 3233266 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639325485 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_791054 |
|---|
| Protein GI | 116050129 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.564712 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.0790295 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCA GCTACGACGA CACCCGCCAG CATCTGCTCG ATACCGGATA CCGGATCATG
GCGGTCAAAG GCTTCTCCGG CGTCGGCCTC AACGAAATCC TGCAGACCGC GGGCGTTCCC
AAGGGCTCGT TCTACCATTA CTTCAAATCC AAGGAACAGT TCGGCCAGGC CCTGCTGGAG
GACTACTTCC GCGTCTACCT GGCGGACATG GACCAACGCT TCTCCGCGCC AGGGCTGAAT
GCCCGCGAAC GACTGATGAG TTACTGGCAG AAGTGGCTGG ACAACGCCTG CCCGCCCTGC
GACGAGCAGC GCTGCCTGGT GGTCAAGCTC AGCGCCGAGG TCGCGGACCT TTCGGAAAGC
ATGCGCATCA CCCTGCGCGA CGGCTCCGAC GGGATCATCG AACGCCTGGT CGGCTGCCTC
GGGCAGGGCC GCGACGACGG CTCCCTCGCG CCCTGCGATG CCCGGCACAT GGCCAGCGCG
CTGTACCAGT TGTGGCTCGG CGCGAGCCTG CTGAGCAAGC TGCACCGCAG CCCGGGACCG
CTGGAAACAG CCATGCAGAC CACCCGCAGC CTGCTGGAAA TCTGA
|
|---|
| Protein sequence | MKPSYDDTRQ HLLDTGYRIM AVKGFSGVGL NEILQTAGVP KGSFYHYFKS KEQFGQALLE
DYFRVYLADM DQRFSAPGLN ARERLMSYWQ KWLDNACPPC DEQRCLVVKL SAEVADLSES
MRITLRDGSD GIIERLVGCL GQGRDDGSLA PCDARHMASA LYQLWLGASL LSKLHRSPGP
LETAMQTTRS LLEI
|
|---|
| |