| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_36220 |
|---|
| Symbol | |
|---|
| ID | 4380334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 3226187 |
|---|
| End bp | 3226903 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639325478 |
|---|
| Product | putative amino acid permease |
|---|
| Protein accession | YP_791047 |
|---|
| Protein GI | 116050136 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0769892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.00221047 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGCG AACTTCTCGC CCCGCAGTAC CTGCGCTGGT TGCTCGACGG CTTCCTGCTG
ACCCTCGGCC TTGCCCTGCT CAGTTGCCTG CTCGCCACCC TGATCGGCGC CCCCCTGGCC
ATCGCCCGGC TGTCGCGCCG ACGCCTGCTG TCCTGGCCGG CGCGCGCCTA CCTGGCGCTG
TTCCGCAATA CCCCGCTGCT GGTGCAGCTG TTCTTCTGGT ACTTCGGCGT TCCCGCGCTG
CTGCCGGAAG CGCTGGTGAG CTGGCTGAAC ACGCCGCACG AGACGCCCTT GCTCGACTGG
CCGTCCTTCG AGTTCCTCGC CGGTGCCTGG GGGCTGACCC TCTATACCTC GGCTTTCGTC
GCCGAGGAGT TCCGCGCCGG CATCGCCTCG GTACGCCCCG AGCAGCGCGC CGCCGGCCTC
GCCCTGGGGC TGACCCAGCG CCAGGTATGG CGCGTGGTGG TGCTGCCGCA GGCCCTGCGC
ACGGCCCTGC CGCCGCTGCT CGGGCAGTAC ATGAATGCGC TGAAGAACTC CTCGCTGGCG
ATGGCCATCG GCCTGGCCGA GCTGTCCTAC GCTTCGCGCC AGGTGGAAAC CGAGACCTTC
AAGACCTTCC AGGCCTTCGG CATCGCCACC CTCCTCTACA TCGGCGCCAT CGCCCTGATC
GAAGCCTTCG GCCAGGCGTT GCAGCAGACC CGCCGCTACC GCCAGGGAGG TGCCTGA
|
|---|
| Protein sequence | MFGELLAPQY LRWLLDGFLL TLGLALLSCL LATLIGAPLA IARLSRRRLL SWPARAYLAL
FRNTPLLVQL FFWYFGVPAL LPEALVSWLN TPHETPLLDW PSFEFLAGAW GLTLYTSAFV
AEEFRAGIAS VRPEQRAAGL ALGLTQRQVW RVVVLPQALR TALPPLLGQY MNALKNSSLA
MAIGLAELSY ASRQVETETF KTFQAFGIAT LLYIGAIALI EAFGQALQQT RRYRQGGA
|
|---|
| |