| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_36120 |
|---|
| Symbol | |
|---|
| ID | 4380341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3218748 |
|---|
| End bp | 3220073 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639325471 |
|---|
| Product | putative MFS transporter |
|---|
| Protein accession | YP_791040 |
|---|
| Protein GI | 116050143 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0000263423 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAGG CACAGACCGC CGTGCTCCAG GCTGATCCTG CCCAGGACAA GGCCACTGCC
GCAAAACCCA GCAACGTCCG CTGGCGCATC TTCGCCATCG TCTTCGCCCT GACGGTGATC
AACCTGGTCG ACCGGGTCTC GCTGTCCATC GCCATGCCCA CCATCGCCGG TGAATTCCAG
CTCACGCCGA GCATGCAGGG GCTGATCCTC AGCAGCTTCT TCTGGGCCTA CGCGCTGTTG
CAGATTCCCG GCGGCTGGCT GATCGACCGC TACGGCCCGC GCCGGGTGAT CGGCTGGTCC
ACCGGCCTCT GGGGAGCCTT CCAGACCCTC GCTGCCTTCG CCAGCGGCGG CCTGTCGCTG
ATGTTCGCCC GGGTCGCCCT GGGCGCGGCG GAAGCGCCGC TGTTCCCCTC CGGCGGCAAG
CTCAACTCGC TGTGGCTGGG CTCCAGCGAA CGCAGCCGCG GCGCCGTGCT GATGGACTGC
GGAGGGCCGC TGGGCGTCGC TCTCGGCGGA CTGGTCATCG CCTACCTGAT CGCCGTGCTC
GGCTCCTGGC GCAGCGCCTT CTTCATCGCC GGCATCGCCA CCCTGGCCAT GGCCTGGCTG
GCCTGGCACT ACCTGCGCGA CGACCCGGCC GAGCATCCCG GGGTCAACGC CGCCGAGCTG
GACCGGATCA ACGCCGACCG CTCCACCCCG CTCGCCGAAG CGGACTGCCA GGCCGGCGGA
AGACTGGGCA TCGCCGGCCG CTCCCTGGTC GGTATCGTCC TCGGCCGCGC CAGTTGGGCC
ATGGTGTTCT TCGGCCTGCT GACCTGGGGT CCTAGCTACC TGGCGCAGGC GCGCGGCTTC
GATATCAAGG GTATCGGCGC CGCGACCTTC GTCATCTTCC TCTGCGGCGC CGTCGGTTCC
CTGGTCGGCG GCTTCCTCTG CGACCTGCTG ATCCGCAAGG GCGTGCGCCG CGGCCTGGCG
GCCAAGGGCC TGCTGACGGT CTCGGGCCTC GCGGCGCTGG TCGCCTTCCT GCTGTTGCCG
AGCCTGGAAG ATGCCTATGC CGCCGTGACC CTGCTGGCGC TGACCGCCTT CTTCCTGATG
TGGGGCAGCC TGTACTGGAG CTTTCCGGCC TTGCTCGCCG CTCCGGCCCG GGTCGGCCTG
GTCGGCGGGG TGATGAACAT GGCCGGCAGC CTCGGCGGCA TCGCCGTGCC GATCCTGGTC
GGGCTGCTGC TGCAACACCT GGGCGGATAT GCCGCGGTGC TGGGCTTCTT CGCCCTCTGC
TCGGCAGCCT TCATCGCCGG CACCCTGCTG ATTTCCCTGG ACAAGACCGA GGCAAAGCAT
GGCTGA
|
|---|
| Protein sequence | MAQAQTAVLQ ADPAQDKATA AKPSNVRWRI FAIVFALTVI NLVDRVSLSI AMPTIAGEFQ
LTPSMQGLIL SSFFWAYALL QIPGGWLIDR YGPRRVIGWS TGLWGAFQTL AAFASGGLSL
MFARVALGAA EAPLFPSGGK LNSLWLGSSE RSRGAVLMDC GGPLGVALGG LVIAYLIAVL
GSWRSAFFIA GIATLAMAWL AWHYLRDDPA EHPGVNAAEL DRINADRSTP LAEADCQAGG
RLGIAGRSLV GIVLGRASWA MVFFGLLTWG PSYLAQARGF DIKGIGAATF VIFLCGAVGS
LVGGFLCDLL IRKGVRRGLA AKGLLTVSGL AALVAFLLLP SLEDAYAAVT LLALTAFFLM
WGSLYWSFPA LLAAPARVGL VGGVMNMAGS LGGIAVPILV GLLLQHLGGY AAVLGFFALC
SAAFIAGTLL ISLDKTEAKH G
|
|---|
| |