Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_36100 |
Symbol | pdxA |
ID | 4380343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3216786 |
End bp | 3217799 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325469 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_791038 |
Protein GI | 116050145 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000000660451 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGCTC CATCCCTACC GCGACTGGCC ATGGTCCTGG GCGATCCGGC CGGCATCGGC CCGGAACTGA TCGCCCGCCT GCTGGCCGAC ACCGAGGTGC GCGAGAAGGC GCACATCGTG CTGATCGCCG ACGAAGCGGA AATGCGCCGC GGCATGCGCA TCGCCGGCTG CGAATTCCCC TACCGACGCA TCGACGCCCT GGAGACCCTG GATTTCGCCG ACGCCACGCC ATTGCTGCAT CCCTGGCTCA GCCAGGGCGG GGACGAGTTC CCACGCAGCG AAGCGAGCGC CGTCGGTGGC CGCTACAGCC TGGAAACCCT CGCGCTGGCC CTCGAACTGA CCCGCAGCGG CAGGACCGAC GCGATCCTCT TCGGCCCGCT GAACAAGACC TCGCTGCACA TGGCCGGCAT GGACCACAGC GACGAGTTGC ACTGGTTCGC CGAGCGCCTG GGGTTCGGCG GCCCGTTCTG CGAGTTCAAC GTCCTCGACG ACCTCTGGAC CTCGCGGGTG ACCTCCCACG TAGCCCTGGC CGAGGTGCCG GGCCTGCTCA GCCAGGAGCG GGTAGGGGAG GCGATCCGCC TGATCGACGA CGCGCTGCGC CGCAGCGGCC TGGCGCGGCC GCGCATCGGC GTCTGCGGAC TGAACCCGCA CAACGGCGAC AACGGCAGCT TCGGCCGCGA GGAGCTGGAC ATCATCGCTC CGGCGGTGCA GAAGGCGCGC GAACAGGGGA TCGCCGCCGA CGGCCCGTAT CCCGCCGACA CCATTTTCCT CAAAGTGCAG GGCGACGCCC GTGCCTTCGA CGCGGTGGTG ACCATGTACC ACGACCAGGG GCAGATCGCG ATCAAGCTGA TGGGCTTCTC CCGCGGCGTG ACCGTCCAGG GCGGCCTGCC GATCCCCATC GCTACGCCGG CCCACGGTAC CGCCTTCGAT ATCGCCGGGC AGGGAAGGGC CGACGTCGGC GCCACCCGCC AGGCGTTCGA GATCGCCTGC CGGATGGGCA GACGCAAAGC CTGA
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Protein sequence | MNAPSLPRLA MVLGDPAGIG PELIARLLAD TEVREKAHIV LIADEAEMRR GMRIAGCEFP YRRIDALETL DFADATPLLH PWLSQGGDEF PRSEASAVGG RYSLETLALA LELTRSGRTD AILFGPLNKT SLHMAGMDHS DELHWFAERL GFGGPFCEFN VLDDLWTSRV TSHVALAEVP GLLSQERVGE AIRLIDDALR RSGLARPRIG VCGLNPHNGD NGSFGREELD IIAPAVQKAR EQGIAADGPY PADTIFLKVQ GDARAFDAVV TMYHDQGQIA IKLMGFSRGV TVQGGLPIPI ATPAHGTAFD IAGQGRADVG ATRQAFEIAC RMGRRKA
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