| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_35830 |
|---|
| Symbol | tnpT |
|---|
| ID | 4381401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 3188265 |
|---|
| End bp | 3189263 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639325446 |
|---|
| Product | cointegrate resolution protein T |
|---|
| Protein accession | YP_791015 |
|---|
| Protein GI | 116050168 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000000000214436 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 7.37164e-20 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTG GTGGAATCAA CAAAGCTGTC GTGCAGAAAG CCAGGCATGC CCTCCTCGCC
CGCGGCGCCC ACCCCAGTAT TGATGCGGTG CGCATCGAGC TGGGCAACAC CGGTTCAAAG
ACCACCATTC ACCGCTACCT GAAAGAGCTC GAAGACGCCG AGCGCGGCCG GGATGCGGCT
TCGATCCCGC TCAGCGAACA GCTGGCCAAT CTGGTCAGCC AACTGGCAGA TCAGCTAGAG
GAGGAGGCGC AGGCCGCGGT GGCCCTGGAG CGCGAACAAC TGACCCGCGA ACGGCTCGAT
TACCAGCATC GGTTTCGACA GGCCGAAAGC CGCATCCAAC AACTGGAAGG CCAGACCGCG
CTCGACGCGG AACGGCTTCA GACCACTCAT CACGAGTTGC AGCAGGCACG CGAGCAACGG
CAACAGGCCG AGATCGAGAA CGCCCGCCTA CAGCAGGCTA ATCGTGACCT CGAGGAGCGG
CACAAGGATC GCGACGCACA GATCCACTCG CTGGAGGAAA AACACCGACA TGCGCGCGAC
ACCCTGGAGC ACTACCGACA GGCCAGCAAG GAACAGCGTG AGCAGGAACA ACGCCGACAC
GAGTCGCAGG TACAACAACT GCAACTAGAA CTGCGGCAAC TGCAGCAGAC CTTGATAATC
AAGCAGGACG AGCTGACGCA ACTGAACCGC GACAATGCAC GCTTGCTCAC CGAGGCGCGG
CAGTTGCAAA AAGAGCGACA TGCACAGCAA CAGCTAGTGG CGCAGAAAAC TCAGGCCCTG
GAGGCTCTGC AGAGCACGCT GGCCGGCTCC GAACGCACGA ATGAAGCCCT TGATCAGCGT
TGTCGCACAT TGCAGGAGGA GGTGTCCCGG CTGAGCGAAG CCTCCGCGCT TCAGGCGCAG
CAGACGCAGG GCCTGCAGAA GCGCTTGGTC GAAGCCACTA CACAGCTGAA GCTACTCGGG
GCACCGCTTG CGAACAGCGA TGGCGCATGT AGCACATGA
|
|---|
| Protein sequence | MARGGINKAV VQKARHALLA RGAHPSIDAV RIELGNTGSK TTIHRYLKEL EDAERGRDAA
SIPLSEQLAN LVSQLADQLE EEAQAAVALE REQLTRERLD YQHRFRQAES RIQQLEGQTA
LDAERLQTTH HELQQAREQR QQAEIENARL QQANRDLEER HKDRDAQIHS LEEKHRHARD
TLEHYRQASK EQREQEQRRH ESQVQQLQLE LRQLQQTLII KQDELTQLNR DNARLLTEAR
QLQKERHAQQ QLVAQKTQAL EALQSTLAGS ERTNEALDQR CRTLQEEVSR LSEASALQAQ
QTQGLQKRLV EATTQLKLLG APLANSDGAC ST
|
|---|
| |