| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_35790 |
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| Symbol | |
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| ID | 4382104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3183178 |
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| End bp | 3184587 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639325442 |
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| Product | putative homospermidine synthase |
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| Protein accession | YP_791011 |
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| Protein GI | 116050172 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5310] Homospermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000430191 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 6.17783e-20 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGATTTTT CAATTAATCC CCCCCAGCGA ATTGTCTTTG TGGGACTAGG AACGATTGCC
CAGTCCTTCC TTCCTCTCCT TTCTAAGGTT CACGACTTAT CTACTTTAGA AATCTACGCG
ATCGATCCAA AAACACCACC GCTTATTGAG TACTTTGCTA ACAGTTTTGG CTTAAAATTT
ATCAACTCTG CAATTGATCA AATCAACTAT CGCGACATTC TTGTGCCGAT TCTTGGTGAA
GGGACGGTTC TAATAAATCT ATCAACCGAT GTCTCAAGTC TTGCCCTGAT AGAATTATGC
CGCTCCGCAG GGGCTCTTTA TTTAGACACA TGCATTGAGC CGTGGAAGGG CGGATATGAT
GACCCAACCA TACCACTGCA TAAGCGAACT AACTATCACT TAAGAGAACA AATGCTGTCT
CTGAAAAAGA GGCTAGGCTC AGGGGTGACG GCTCTCGTGG CGCATGGCGC GAATCCTGGG
TTGGTATCCC ACTTCGTTAA ACGTGCTCTT TTAGATTTAG CGGAAGAGAT ATTGGGTGAT
TGTAAAAAGC CCTCTAATAA AGAGCAGTGG GCTATCCTAA GCCAAAGATT GGGTGTCAAA
GTAATCCATG TCGCAGAGTA CGACTCGCAA ATTTCTCAGA AATCTAGGGA GAGGGGTGAG
TTCGTAAATA CTTGGTCAGT GCATGGGTTC ATAAGTGAGT CGCAACAACC GGCAGAGTTG
GGCTGGGGAA GTCACGAGCG AAGTCTACCC ACGGATGCGT CAATGCATAC AGATGGATGC
GGAGCAGCAA TCTATATTGA GAAGCCAGGG GCCTCTGTTA GAGTTAAGAC ATGGACGCCA
TTTAACGGCC CTAGCTTAGG TTATTTGGTA ACTCATCACG AGGCAATTTC AATTGCTGAC
TTTTTGACGC TCAGAACTGC CGATGAGACA TATAGACCAA CTGTCCATTA TGCCTATCGC
CCAAGCGATG AAGCAATTCT CTCTGTACAT GAATGGTTCG GCAATGATTG CATGACTCCA
GAAAAGACAA AAGTACTTCG TCCTGGTGAT ATCTTGTCGG GTTCTGATTA CCTCGGTGTT
CTTCTTATGG GGCACGAAAA ATCTAGTTAT TGGTATGGAT CTATCTTAAG CATCGAAAAG
GCCAAGGAAC TTGCCACTCT CAACACTGCA ACAACGTTAC AGGTAGCAGC CGGAGTTCTT
TCCGGTTACT TATGGATCCT GAGCCATCCG TCGGCAGGAA TAATTGAAGC CGAAGACATG
GATCATGAAG TGGCACTATC TTATATTTCA CAGTATCTAG GCGAACTAAA AGGGGTTTAT
TCGGACTGGA ATCCTACCAA AAACAACCCA GGCACCTTTT CGGCCATAGA TAGCGACTCT
CCCTGGCTGT TCTCAAATTT TGTCCTCTGA
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| Protein sequence | MDFSINPPQR IVFVGLGTIA QSFLPLLSKV HDLSTLEIYA IDPKTPPLIE YFANSFGLKF
INSAIDQINY RDILVPILGE GTVLINLSTD VSSLALIELC RSAGALYLDT CIEPWKGGYD
DPTIPLHKRT NYHLREQMLS LKKRLGSGVT ALVAHGANPG LVSHFVKRAL LDLAEEILGD
CKKPSNKEQW AILSQRLGVK VIHVAEYDSQ ISQKSRERGE FVNTWSVHGF ISESQQPAEL
GWGSHERSLP TDASMHTDGC GAAIYIEKPG ASVRVKTWTP FNGPSLGYLV THHEAISIAD
FLTLRTADET YRPTVHYAYR PSDEAILSVH EWFGNDCMTP EKTKVLRPGD ILSGSDYLGV
LLMGHEKSSY WYGSILSIEK AKELATLNTA TTLQVAAGVL SGYLWILSHP SAGIIEAEDM
DHEVALSYIS QYLGELKGVY SDWNPTKNNP GTFSAIDSDS PWLFSNFVL
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