Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_35690 |
Symbol | pslE |
ID | 4382114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3172559 |
End bp | 3174547 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639325432 |
Product | hypothetical protein |
Protein accession | YP_791001 |
Protein GI | 116050182 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0001855 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 6.19031e-17 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAGAAA TTCGTTCCTT GCGTGATCTG TTGCGCCTGC TGTTCATCTA CCAGCGCGAG TTCAAGCTGG CGGCCCTCAG CGCGGTGGTG ATCATCGTCC TCGGCGCCTT CCTGCTGCCG GCCAAGTACG AGTCCAACGC ACGCCTGCTG GTCAAGCCGG GTCGTGACTC GACCCTGCCG ATCGAGATCA GCAACCGCCA GGCACTGGTG ATGCCGAGCA CCCAGCGCGA CCCTATCGTC GACGAAGAAC GCCTGCTCAC CGGCCGGCCG ATCGTCCGCC AGGTGGCCGA GCGCTACCTC GAGGTGCTGG CCAACCGGCC GCCGCCGGAG GGCCTGTGGA AGCGCACCAA GTTCTATGTG AAGAAGGCCA TCGGCGCGGT GTTCGACGGG ATTCGCGTGA CCCTGGAAAC CTTCGGCGTG ATCGAGGAAA CCACCGCGGT CGAGCGCCTG GCCAAGGACC TGGAGAAGAA ATTCGAGGTC ACCCATGCGG CCGGCTCGAC GGTGATGGAG ATCAGCTTCA CCTGGAGCGA GCCGGAAGTC GCCCAGGAAG TGGTCAAGGC CTGGATCGAG ATCTACATGG AAGAGCGCAC CCAGGCGCTC GGCCGCAAGA GCCTGTACGC CTTCTACGAG GCGCAGACCG CCGACAGCGC GGCGCAGATC AAGAGCTACA AGGCGCAGAT CCTCAAGCAC CTCAACGAGA TCGGCGCATC CAGCATCGAG GACCGCCTGC AGGACCTGTC CGAGCGGATC AACGTGCTGC GCGGCGAGCG TTTCAACTCG ATCCGCCTGA TCGCCTCCTC CGACAGCGCC CTGGAATCCA CCCGCCAGCA ACTCAAGGGG CTGCCCAGGG AGATCGTCAC GGTGCGGCAG ATCGCGCTGA ACCCGGCGCA GCAGGACCTG CGCCGGCTGC TCAACCAGAA GCGCCTGGAA CGCGCCGACA TGATGCGCAC CTACACCGAC GACGCGCCGC CGGTGAAGGC CCTGGACGCC TCGATCCGTG CCCTGGAGAA AGAAGTCCAG GACGAAGGCG CCACCGTGCA GAGTTCCGAG GACCGCGCGC CGAACACCCT GACCACTCAC CTGGAACGGG TCCTGCTGGA CGAGACCAGC AACAACGCGG CCCTGCGCAC CCAGCTCGCG GAGCAGGAAA AGCAGCTCGC CGAACTCGAG GCGCAACGGC GCGAAGCGCT GGACATCGAG CCGACCCTGG CGCGCCTGCA GCGCGAGCTG AACGCCACCG AGCGCAACTA CGCGCTGTAC GTCGACAGCC TGGAGAAATC GCGGATCGAC CGTGAACTGG ACAAGAGCCA GATCAGCAAC ATCTCGGTGA TCGAGGAAGC CACCTACAAC CCCGGGCGGA TCTTCCCGAA AACCCTGCTG ATGCTGTTCC TCGCCGTGCC CTTCGGTCTC GCCGTCGGCC TGCTGGTGGT CTATCTCTGC TACCTGCTCG ACCAGCGCAT CCACGACGGC GGCCTGGTCG AGGAGAAATT CGGCCTGCCG CTGTGGACCA CCCTGCCGGA GCTGAGCAAC AGCACCGCGG AGAGCAGCAA CGCCTTCACC GCCAGCATCT ACCGGCTGTA CGGGCTGCTG CCCTACGCGC GCATCGAGGA AAAGGGCCTG ACCCTGGGCC TGACCTCGGC GCGCCACGGT GAAGGCGTGA CCTTCATCAT CGAGCAACTG CGCCGCCTGC TGGAGGAAAA CGGCGTGCGC GTGCGGGTCG GCGGCGAACC GGCCCAGCCG GGCGAAGTGG TATTGCTCGA CGCGCCGGCC CTGCTGGACA GCCGCGAGGC CTTCATCGCC CTGCGCCGCG CCGACCTGAT CGCCCTGGTG GTGGAGGCGC AGAAGAGCAC CGTGCCGGTG GTCGAGCATG CGCTGACCAT CCTCACCACG GCGTTCGGCA AGGTCGACGG GATCATCATC AACCGGCGCC GCTTCGAGGT GCCGAGCAAG GTCCTGCAGA CCATCGCCCG CTACCGGAGC GCGTTCTGA
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Protein sequence | MIEIRSLRDL LRLLFIYQRE FKLAALSAVV IIVLGAFLLP AKYESNARLL VKPGRDSTLP IEISNRQALV MPSTQRDPIV DEERLLTGRP IVRQVAERYL EVLANRPPPE GLWKRTKFYV KKAIGAVFDG IRVTLETFGV IEETTAVERL AKDLEKKFEV THAAGSTVME ISFTWSEPEV AQEVVKAWIE IYMEERTQAL GRKSLYAFYE AQTADSAAQI KSYKAQILKH LNEIGASSIE DRLQDLSERI NVLRGERFNS IRLIASSDSA LESTRQQLKG LPREIVTVRQ IALNPAQQDL RRLLNQKRLE RADMMRTYTD DAPPVKALDA SIRALEKEVQ DEGATVQSSE DRAPNTLTTH LERVLLDETS NNAALRTQLA EQEKQLAELE AQRREALDIE PTLARLQREL NATERNYALY VDSLEKSRID RELDKSQISN ISVIEEATYN PGRIFPKTLL MLFLAVPFGL AVGLLVVYLC YLLDQRIHDG GLVEEKFGLP LWTTLPELSN STAESSNAFT ASIYRLYGLL PYARIEEKGL TLGLTSARHG EGVTFIIEQL RRLLEENGVR VRVGGEPAQP GEVVLLDAPA LLDSREAFIA LRRADLIALV VEAQKSTVPV VEHALTILTT AFGKVDGIII NRRRFEVPSK VLQTIARYRS AF
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