| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_35650 |
|---|
| Symbol | pslH |
|---|
| ID | 4382117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3168837 |
|---|
| End bp | 3170045 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639325429 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_790998 |
|---|
| Protein GI | 116050185 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.793748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00000000053006 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTC TCTGGATCCT GCCCTACTCG CCCTGGCCCA CCACCAGCGG CGGCAAGACC
CGCCAGTACC ACCTGCTGCG CAGCCTCGCG GCACGCGGCC ACCGGATCAC CGTGCTGCTG
CACAGCAAGC AGCCGGTGAG CGCCGAGGAT CGCCAGGCCC TGGAGCCCTT CCTCGAACGC
CTGGTCGTGC TGCCGCGCCG ACCGCTGCGC AGCCTCTCCA CGCTGCTCGC CGCGCTGTTC
GCGCCCTACC CGCTGCTGGC CAGCGTCAAC GGCCTGTCGG CGGAGCTGCA ACGCACCGCC
ACGGAGTTGC TGCGCGAGCC CTGGGACGTG GTCCAGGTCG AGCACAGCTA TAGCTTCCAG
CCCTACGAGC GACCGCTGCG CGACGCCGGC CAGCCGTTCG TGCTCACCGA GCACAACGTC
GAGTCGTCCC TCGGTGCCGC CACCTACGAC CGCCTGCCGG GCTGGGCGCT GCCCTTCGTG
CGCTACGACC AGTGGCGTTA CCGCCGCTGG GAACGCCGGG TGATGGGCCA GGCGGCAGCG
GTCGTCGCCG TGACCGAGAA AGATGCGCGG CAGCTCGGCG CGATGCTCGG GCGCCCGGTG
CCAGTGGTGG TCAACGGGGT CGACTGCGAG CACTTCGCCG CCGCCCGGCC GACGCCCGAA
GCGCAGCGCG TGCTGTTCCT CGGCAACTAC GAATACGCAC CGAACGTCGA TGCCGTGGAA
TGGATGCTCG ACGAGATCCT GCCGCGGGTC TGGGCACACT GCCCCGAGGC GCGCATGAGC
GTCTGCGGCT ATGCGCTGCC GGCGGAGTGG GCGCAACGCT GGAGCGATCC GCGCATCGAA
TGGCAAGGCT TCGTTCCCGA CCTGCTGCAA CTGCAATCGA GCAGTTCGGT GTTCCTCGCC
GCGCTGCGCC ATGGCGGCGG TTCGAAGCTG AAGGTGCTCG AGGCCCTGGC CGCCGGGCTG
CCGCTGGCGA GTACCGCGCA GGGCGTTTCC GGCCTGGAAC TGCGGGACGG CGAGGACTAC
CTGGGCGGCG AAACCGCCGA GCAGCTCGCC AACGCCGTGG TGCGCCTGTT GCAGGACCCC
GCGCAGGCCC GCTCGCTGGG CGAGAACGGC CGCGCCTACG TACGTCGCGC GCACGACTGG
AGCGTCGCCG CCAGCCAACT GGAACAGGTC TACGCCGGCC TCGCCGAAGG AGCGCCGGCA
TGCGCATAG
|
|---|
| Protein sequence | MRILWILPYS PWPTTSGGKT RQYHLLRSLA ARGHRITVLL HSKQPVSAED RQALEPFLER
LVVLPRRPLR SLSTLLAALF APYPLLASVN GLSAELQRTA TELLREPWDV VQVEHSYSFQ
PYERPLRDAG QPFVLTEHNV ESSLGAATYD RLPGWALPFV RYDQWRYRRW ERRVMGQAAA
VVAVTEKDAR QLGAMLGRPV PVVVNGVDCE HFAAARPTPE AQRVLFLGNY EYAPNVDAVE
WMLDEILPRV WAHCPEARMS VCGYALPAEW AQRWSDPRIE WQGFVPDLLQ LQSSSSVFLA
ALRHGGGSKL KVLEALAAGL PLASTAQGVS GLELRDGEDY LGGETAEQLA NAVVRLLQDP
AQARSLGENG RAYVRRAHDW SVAASQLEQV YAGLAEGAPA CA
|
|---|
| |