Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_35600 |
Symbol | pslL |
ID | 4382121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3163743 |
End bp | 3164810 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639325425 |
Product | hypothetical protein |
Protein accession | YP_790994 |
Protein GI | 116050189 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3594] Fucose 4-O-acetylase and related acetyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.110812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00000141946 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAAAAAAC GCTGGATTCA GATGGATGTG ACCCGCGGCG TGGGCATCCT GATCATCGTC TTCGGACACA GCTGGTTCGT CGCCAGTTCG CCGACCGTGC TCTATCCGTT GCTCTCTCCG TTCATCCTGC CACTGTTCTT CTTCATTTCC GGGGTGTTCT TCAGGACCGA GCAACCCTTC GGCGAGATGG CCCTGCGCAA GGCCGACGCC CTCCTCAAGC CGTTCTTCGT GACCATGCTC GGCTACGTCA TCCTCCGCGA CCTGCTGCGC GGCCAGCCGC TGCTGCCGGA CATCGGCGGA GTGCTGTACG CCTCGGTCGA CACCCTGCCC TGGCAGGCGC TCTGGTACCT GCCGCACTTC TGGGTAGCGA CCCTGTTCGC CTGGTTCATG CTGCGCGTCA TCCAGCGTCT CGGCCTGTCC CTCGCCGCCA GTTGCGTGCT GCTGGCCGTG CAACTGGGCC TGGGCATCCT GTTCCTCAAG ACGTTCTGGC AGATCCCGGT GGAGTTCGGC GGCGAACAGT ACCTGCTGCC GGGCCTGCCG TTCAGCCTGG ACATCACCCT GATCAGCAGC GCCCACTTCA TGTTCGGCTA TGTCCTGCGC GACGTCCTGC GTCGCCACCA GAGTTCGTTG CTGACCCTGT GCATCGCCCT TGCCGTGACC ACCGCCAGCT TCCTCTACTA CCCGACGGTG GTGGACATGG CGCAGCGCCG CTACGACCAC TGGTTCTGGG CCACCGTCCA GGCAGTGAGC GGCGTCTACC TGTGCTGGGC GCTGTCCGGG CTGATGATGA AGATCGACTG GCTGGGCAAG GCGATGACCT ACATCGGCCA GTCGACCCTG ATCCTGCTGA TCTTCCACGG CGAGATCCAG CACAAGACCT TCAACCTGCT GGTCCACCTG GGCCTGTCGG AACCGGCCGC TGCCAGCGTC GCCCTGGTGA TCTCGGTGAT CGCCTCGCTG CTGATCGGCG AAGTGATCAA GCGCGTCGCG CTGCTGCGCG CCCTCTACTT CCCCTTCCCG GTGCGCAAGA AGGCCGCCGC GGTCCAGGGC GGCGGCGAAG CGCGCTGA
|
Protein sequence | MKKRWIQMDV TRGVGILIIV FGHSWFVASS PTVLYPLLSP FILPLFFFIS GVFFRTEQPF GEMALRKADA LLKPFFVTML GYVILRDLLR GQPLLPDIGG VLYASVDTLP WQALWYLPHF WVATLFAWFM LRVIQRLGLS LAASCVLLAV QLGLGILFLK TFWQIPVEFG GEQYLLPGLP FSLDITLISS AHFMFGYVLR DVLRRHQSSL LTLCIALAVT TASFLYYPTV VDMAQRRYDH WFWATVQAVS GVYLCWALSG LMMKIDWLGK AMTYIGQSTL ILLIFHGEIQ HKTFNLLVHL GLSEPAAASV ALVISVIASL LIGEVIKRVA LLRALYFPFP VRKKAAAVQG GGEAR
|
| |