Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_35540 |
Symbol | bkdR |
ID | 4384411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3159938 |
End bp | 3160399 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639325421 |
Product | transcriptional regulator BkdR |
Protein accession | YP_790990 |
Protein GI | 116050193 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.526091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.000450665 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGAAC TCGACCGCAT CGACCTGAAA ATCCTCCGCG CCCTGGCCGA CGACGGCCGC CTGAGCTGGC GCGATCTCGC CCAGAAGGTC GGCCTGTCGC TGACGCCGAC GCTGCGCCGG GTACGCCGCC TGGAAGAGGA ACACTACATC CAGGGCTACT TCGCCCGGCT CGACGAGGAG CGCCTGTCCG GGGCGATGAG CGTGTTCGTC TCGGTGTCCC TGGAAAAGCA GACCGGCGAC TACCTCGCGC GCTTCGAGGA ACGCATCGTC GATGCGCCGC AGGTCATGAG CTGTTTCCAG ATGACCGGCG ATGCGGACTA CATGCTGCGG GTTGTGGTCA AGGATCTCGC CGCCTACCAG GCGTTCCTCA CCAATACCCT GACCTGCATT CCCGGCGTGG CTGGCATCAA GTCGGCCTTC GCGCTGAAGT CGGTGATGCT GCGCTCGGCC CCGCCGCTCT AA
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Protein sequence | MAELDRIDLK ILRALADDGR LSWRDLAQKV GLSLTPTLRR VRRLEEEHYI QGYFARLDEE RLSGAMSVFV SVSLEKQTGD YLARFEERIV DAPQVMSCFQ MTGDADYMLR VVVKDLAAYQ AFLTNTLTCI PGVAGIKSAF ALKSVMLRSA PPL
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