| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_35490 |
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| Symbol | lpdV |
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| ID | 4384415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3154662 |
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| End bp | 3156056 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639325417 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_790986 |
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| Protein GI | 116050197 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.00730291 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCAGA TCCTGAAGAC TTCCCTGCTG ATCGTCGGCG GCGGTCCCGG CGGCTACGTC
GCGGCGATCC GTGCCGGGCA ACTGGGCATT CCCACCGTAC TGGTGGAGGG CGCCGCCCTC
GGCGGCACCT GCCTGAACGT CGGCTGCATC CCGTCGAAGG CGCTGATCCA CGCCGCCGAG
GAATACCTCA AGGCCCGCCA CTATGCCGGC CGGTCGGCGC TGGGCATCCA GGTACAGGCG
CCGAGCATCG ACATCGCCCG CACCGTGGAA TGGAAGGACG CCATCGTCGA CCGCCTCACC
AGCGGCGTCG CCGCGCTGCT GAAGAAACAC GGGGTCGATG TCGTCCAGGG CTGGGCGAGG
ATCCTCGACG GCAAAAGCGT GGCGGTCGAA CTCGCCGGCG GCGGCAGCCA GCGCATCGAG
TGCGAGCACC TGCTGCTGGC CGCAGGCTCG CAGAGCGTCG AGCTACCGAT CCTGCCGCTG
GGCGGCAAGG TGATCTCCTC CACCGAGGCG CTGGCGCCCG GCAGCCTGCC CAAGCGCCTG
GTGGTGGTCG GCGGCGGCTA CATCGGCCTG GAGCTGGGTA CCGCCTACCG CAAGCTCGGC
GTCGAGGTGG CGGTGGTGGA AGCGCAACCG CGCATCCTGC CGGGCTACGA CGAAGAACTG
ACCAAGCCGG TGGCCCAGGC CTTGCGCAAG CTGGGCGTCG AGCTGTACCT CGGGCACAGC
CTGCTGGGCC CGAGCGAGAA CGGCGTGCGG GTCCGCGACG GCGCCGGCGA GGAGCGCGAG
ATCGCCGCCG ACCAGGTACT GGTGGCGGTC GGCCGCAAGC CGCGCAGCGA AGGCTGGAAC
CTGGAAAGCC TGGGCCTGGA CATGAACGGC CGGGCGGTGA AGGTCGACGA CCAGTGCCGC
ACCTCGATGC GCAATGTCTG GGCCATCGGC GATCTCGCCG GCGAGCCGAT GCTCGCGCAC
CGGGCCATGG CCCAGGGCGA GATGGTCGCC GAGCTGATCG CCGGCAAGCG TCGCCAGTTC
GCCCCGGTGG CGATCCCCGC GGTGTGCTTC ACCGATCCGG AAGTGGTGGT CGCCGGGTTG
TCCCCGGAGC AGGCGAAGGA TGCCGGCCTG GACTGCCTGG TGGCGAGCTT CCCGTTCGCC
GCCAACGGCC GCGCCATGAC CCTGGAGGCC AACGAAGGCT TCGTCCGCGT GGTGGCGCGT
CGCGACAACC ACCTGGTCGT CGGCTGGCAG GCGGTGGGCA AGGCGGTCTC GGAACTGTCC
ACGGCCTTCG CCCAGTCGCT GGAGATGGGC GCCCGCCTGG AAGACATCGC CGGCACCATC
CACGCCCATC CGACCCTCGG CGAAGCGGTC CAGGAAGCCG CCCTGCGCGC GCTGGGACAC
GCCCTGCACA TCTGA
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| Protein sequence | MSQILKTSLL IVGGGPGGYV AAIRAGQLGI PTVLVEGAAL GGTCLNVGCI PSKALIHAAE
EYLKARHYAG RSALGIQVQA PSIDIARTVE WKDAIVDRLT SGVAALLKKH GVDVVQGWAR
ILDGKSVAVE LAGGGSQRIE CEHLLLAAGS QSVELPILPL GGKVISSTEA LAPGSLPKRL
VVVGGGYIGL ELGTAYRKLG VEVAVVEAQP RILPGYDEEL TKPVAQALRK LGVELYLGHS
LLGPSENGVR VRDGAGEERE IAADQVLVAV GRKPRSEGWN LESLGLDMNG RAVKVDDQCR
TSMRNVWAIG DLAGEPMLAH RAMAQGEMVA ELIAGKRRQF APVAIPAVCF TDPEVVVAGL
SPEQAKDAGL DCLVASFPFA ANGRAMTLEA NEGFVRVVAR RDNHLVVGWQ AVGKAVSELS
TAFAQSLEMG ARLEDIAGTI HAHPTLGEAV QEAALRALGH ALHI
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