| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_35390 |
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| Symbol | pvcD |
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| ID | 4384422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3146722 |
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| End bp | 3147369 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639325410 |
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| Product | pyoverdine biosynthesis protein PvcD |
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| Protein accession | YP_790979 |
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| Protein GI | 116050204 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2863] Cytochrome c553 |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.15131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0513213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAGC GTAAACGCTG GCTGGCCGGC TGCCTCTCGG CCCTGCTTTC CCTGCCGCTG
GCCGCCGCCG TGCCGGGCCC GGACGCGCCG GCCGACCTGG CGCGCGGCAA GGCGATGGCG
CAGAAGATGT GCTCGCGCTG CCACGACGAC GACGGCAACG GCGGGCCACG ACCGAACCGC
AGCTACCCGA AGCTCGCCGG GCTCGACCGG GAATACCTGT ACAAGCAGAT CTACGACCTC
AAGACCCAGC GCCGGCGCAA CCCGGCCACC AACGGTCGCG GCGAGGAGCT GAGCGCGGCG
GACGTGGTCA ACGTCTCCGC CTGGTTCGCC GCCCAGCGCA TGAGTGCCGG CGAGCAGACC
CTGGCCGACC CGGCGCAACG CGAACGCGGT CGCCAGCTCT TCGAGAACGG CCTGGCGCAG
CGCGGCGTAC CCCCCTGCGT CACCTGCCAC GGGCCCGCCG CCCAGGGCCT GGCGGCGCTG
AAGGCGCCGC GCCTTGCCGG GCAATGGGCG GAATACCTGG CAACCCAGTT GCACGGTTTC
CGCGACGGCA AGCGCGGCAA CAGCGCGACC ATGCGCGCGG TCGCCGGCGG CCTGGAGGAT
AGTGACATCC AGGCGCTCGC CGGCTACCTG GGCAGCCTGG GGCCGTAA
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| Protein sequence | MTERKRWLAG CLSALLSLPL AAAVPGPDAP ADLARGKAMA QKMCSRCHDD DGNGGPRPNR
SYPKLAGLDR EYLYKQIYDL KTQRRRNPAT NGRGEELSAA DVVNVSAWFA AQRMSAGEQT
LADPAQRERG RQLFENGLAQ RGVPPCVTCH GPAAQGLAAL KAPRLAGQWA EYLATQLHGF
RDGKRGNSAT MRAVAGGLED SDIQALAGYL GSLGP
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