| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_35190 |
|---|
| Symbol | pbpC |
|---|
| ID | 4380379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3129531 |
|---|
| End bp | 3131228 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639325395 |
|---|
| Product | penicillin-binding protein 3A |
|---|
| Protein accession | YP_790964 |
|---|
| Protein GI | 116050219 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGTC AACGCCGAAA CTACCGCTTC ATCCTTGTCG TCACCCTGTT CGTCCTCGCC
TCCCTGGCCG TCTCCGGACG GTTGGTCTAT CTCCAGGTCC ACGACCACGA ATTCCTCGCC
GACCAGGGCG ACCTCCGCTC GATCCGCGAC CTACCGATCC CGGTCACCCG CGGCATGATC
ACCGACCGCA ACGGCGAGCC GCTGGCGGTA TCCACCGAAG TCGCGTCGAT CTGGTGCAAC
CCCAGGGAAA TGGCCGCCCA CCTCGACGAG GTGCCACGCC TGGCCGGCGC CCTGCACCGC
CCCGCGGCGC CGCTGCTGGC CCAGCTCCAG GCCAACCCGA ACAAGCGCTT CCTCTACCTC
GAGCGCGGCC TGTCGCCGAT CGAGGCCAGC GAGGTGATGG CCCTGGGCAT AACGGGGGTA
CACCAGATCA AGGAATACAA GCGTTTCTAC CCCAGTTCCG AGCTGACCGC GCAGTTGATC
GGCCTGGTCA ACATCGACGG CCGCGGCCAG GAAGGCACCG AACTGGGCTT CAACGACTGG
CTGAGCGGCA AGGACGGAGT ACGCGAGGTG GCGATCAACC CGCGCGGCTC GCTGGTCAAC
AGCATCAAGG TGCTGAAGAC GCCCAAGGCC AGCCAGGACG TGGCCCTGAG CATCGACCTG
CGACTACAGT TCATCGCCTA CAAGGCGCTG GAAAAGGCCG TGCTCAAGTT CGGCGCACAC
TCCGGCTCGG CGGTCCTGGT GAACCCGAAG AGCGGGCAGA TCCTGGCGAT GGCCAACTTC
CCCTCCTACA ACCCGAACAA CCGCGCCAGC TTCGCCCCGG CCTTCATGCG CAACCGCACC
CTCACCGATA CCTTCGAGCC GGGCTCGGTG ATCAAGCCGT TCAGCATGTC GGCGGCGCTG
GCCTCCGGCA AGTTCGACGA GAACAGCCAA GTCAGCGTGG CACCGGGCTG GATGACCATC
GACGGGCACA CCATCCACGA CGTCGCCCGG CGCGACGTAC TGACCATGAC CGGGGTGCTG
ATCAACTCCT CGAACATCGG CATGAGCAAG GTCGCCCTGC AGATCGGACC CAAGCCGATC
CTCGAACAGC TCGGCCGGGT CGGTTTCGGC GCGCCGCTGT CGCTGGGCTT CCCCGGCGAG
AACCCGGGCT ACCTGCCGTT CCACGAGAAA TGGTCGAACA TCGCCACCGC CAGCATGTCG
TTCGGCTACA GCCTGGCGGT GAACACCGCC GAGCTGGCCC AGGCCTACTC GGTGTTCGCC
AACGACGGCA AGCTGGTGCC GCTCAGCCTG CTCCGCGACA ACCCGCAGAA CCAGGTGCGC
CAGGCGATGG ACCCGCAGAT CGCACGGCGC ATCCGGGCGA TGCTGCAAAC CGTGGTAGAA
GACCCGAAGG GCGTGGTCCG CGCCCGCGTG CCGGGCTACC ACGTGGCGGG CAAGAGCGGC
ACCGCGCGCA AGGCCTCGGG CCGGGGCTAC GCGGACAAGT CCTACCGTTC GCTGTTCGTC
GGCATGGCGC CGGCGTCCGA CCCGCAACTG GTGCTGGCGG TGATGATCGA TTCGCCGACC
AGGATTGGCT ACTTCGGCGG CCTGGTCTCG GCGCCCACCT TCAGCGACAT CATGGCCGGA
TCGCTACGCG CCCTGGCGAT CCCGCCGGAC AACCTGCAGG ACAGCCCGGC CGTCGCCGAC
CGCCAGCACC ACGGCTGA
|
|---|
| Protein sequence | MSSQRRNYRF ILVVTLFVLA SLAVSGRLVY LQVHDHEFLA DQGDLRSIRD LPIPVTRGMI
TDRNGEPLAV STEVASIWCN PREMAAHLDE VPRLAGALHR PAAPLLAQLQ ANPNKRFLYL
ERGLSPIEAS EVMALGITGV HQIKEYKRFY PSSELTAQLI GLVNIDGRGQ EGTELGFNDW
LSGKDGVREV AINPRGSLVN SIKVLKTPKA SQDVALSIDL RLQFIAYKAL EKAVLKFGAH
SGSAVLVNPK SGQILAMANF PSYNPNNRAS FAPAFMRNRT LTDTFEPGSV IKPFSMSAAL
ASGKFDENSQ VSVAPGWMTI DGHTIHDVAR RDVLTMTGVL INSSNIGMSK VALQIGPKPI
LEQLGRVGFG APLSLGFPGE NPGYLPFHEK WSNIATASMS FGYSLAVNTA ELAQAYSVFA
NDGKLVPLSL LRDNPQNQVR QAMDPQIARR IRAMLQTVVE DPKGVVRARV PGYHVAGKSG
TARKASGRGY ADKSYRSLFV GMAPASDPQL VLAVMIDSPT RIGYFGGLVS APTFSDIMAG
SLRALAIPPD NLQDSPAVAD RQHHG
|
|---|
| |