Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_35070 |
Symbol | |
ID | 4380388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3122614 |
End bp | 3123468 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639325386 |
Product | AraC family transcriptional regulator |
Protein accession | YP_790955 |
Protein GI | 116050228 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGGCA GCGCCACCGG TCACTACCAG GCGCGGACGG TGCGCCCGTC GATGCAGTAT TTCGATTGCG ACCTGAGCTT CACCGAGCCG CTGCGAACCC ACAAGGTGCT GCCGGAAGGC CTGTGCATCG TGCAGATGTT CGACGGCCAG TGGCGGCACA GCGTCGACGG CGGCGAGCCT TATCTGTACA ACCTGGGCGG TCCTTCGGTG CTCGGCACCG GCGAGCCGAT GGAAGCCTTC GACATCCTGC CGGCGGGCAG CCGCGTGCGC CTGGGTGGGC TGCGGATCGC CGCCAGCTAC CTGGAGGAGG AACTGGAAAC CGGCGATGGC GCCCTGCGGC CGCTGGCGCG GCTGAAGGGC GACGGCGCGA GCTTCACCCA GTTGTCCCGT TGCGGCGCCA TCACCGCCCT GTTCGAGCGC CTCTACCAGA ATCCATACCG CGGCGCCCTC GGACGCCTGC ACGAAGAGAG CCTGACCTTG GGCCTGCTGG TGGAGCTGGC CGCCTACCTG GGTGGCGCGG ACCTTCGTCG CGCGCGCACC CCACGCGCCC AGCGCGACCT GGCCCACGAA GCGCGCCGCC TGCTGGAGGC GAACCTCGGT GAGCCGCCGG CCAGCCTCGA ACTGGCGCGC CAACTGGGGG TCGGCGAAAC CACCCTGCGG CGGATCTTCA GGAACGAGTT CGGTCGCTCG ATGTTGCAGT ACGTCCGCGA CCGGCGTCTC GAGATCGGCC GGCAGATGGT CCGCGAGGGT CGCTGGCAGA TCGCGCAGAT AGCCTATCGC CTGGGTTACT CCAGTCCGGA AAACTTCACC CATGCCTACC GCGCGCGCTT CGGCCATCCG CCGGGGCGCG AGTGA
|
Protein sequence | MLGSATGHYQ ARTVRPSMQY FDCDLSFTEP LRTHKVLPEG LCIVQMFDGQ WRHSVDGGEP YLYNLGGPSV LGTGEPMEAF DILPAGSRVR LGGLRIAASY LEEELETGDG ALRPLARLKG DGASFTQLSR CGAITALFER LYQNPYRGAL GRLHEESLTL GLLVELAAYL GGADLRRART PRAQRDLAHE ARRLLEANLG EPPASLELAR QLGVGETTLR RIFRNEFGRS MLQYVRDRRL EIGRQMVREG RWQIAQIAYR LGYSSPENFT HAYRARFGHP PGRE
|
| |