| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_34970 |
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| Symbol | gcd |
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| ID | 4385329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3111856 |
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| End bp | 3114267 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639325377 |
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| Product | glucose dehydrogenase |
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| Protein accession | YP_790946 |
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| Protein GI | 116050237 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00222942 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG GTAACCACAG TCGATCGCGC CTGCTGCCGA GCCTGCTCGG CCTGTTGATC
CTGCTGTCCG GCCTGGCGCT GCTGGCCGGC GGCATCAAGC TGGCGAGCCT GGGCGGCTCG
CTGTACTACC TGCTGGCCGG CATCGGCCTG GCCCTGAGCG GGCTGTTGCT GCTGCTGGGC
AAGCGTGCGG CGCTAGGCCT GTACGCCCTG GTGCTGTTCG CCAGCACCGT CTGGGCGCTG
TGGGAAGTCG GCCTGGACTG GTGGCAACTG GTGCCGCGCC TGGCCCTGTG GTTCGTCTTC
GGCCTGCTGC TCTGGCTGCC CTGGTTCCGT CGTCCGCTGC TGGCCGAGGG GCCGGCGCCG
CTGGGCACCG CGGCGCTGGG CGTGGCGGTG GTCCTGGCCG GCGCCGCCGC GGTGGGCAGC
CAGTTCACCA ATCCGGGGCA GATCGTCGGT CGCATCGACC GCGACAGCGG CATGACCAGC
ACCGCCCCGG CGATGCCGGA CGGCGACTGG CAGGCCTACG GCCGCACCGA GTTCGGCGAC
CGCTACTCGC CGTTGAAGCA GATCACCCCG GCCAACGTCG GCCAGCTCGA GGAAGCCTGG
CGCATCCGTA CCGGCGACCT GCCGACCGCC GACGATCCGC TCGAACTGAC CAACGAGAAC
ACCCCGCTGA AGGTCAACGG CATGCTCTAC GCCTGCACCG CGCACAGCAA GGTGCTGGCC
CTCGACCCGG ACACCGGCGC GGAAATCTGG CGCTTCGACC CGCAGATCCA GAGCCCGGTA
GGCTTCAAGG GCTTCGCCCA CATGACTTGC CGTGGCGTCT CCTACTACGA CGAAGAGCAG
TACGCCAGGA GCGACGTCGG CGCGCCGCCG GCCGCGCTCT CCGAGGCCGG CAAGGCGGTC
GCCGCCAGTT GTCCGCGGCG CCTGTTCCTG CCCACCGCCG ACGCCCGCCT GATCGCGATC
AACGCCGACA ACGGCAAGGT CTGCGAGGAC TTCGGGGTCA AGGGCGCGGT CGACCTGACG
GCCGGCATCG GTCCGTTCAC CCCGGGCGGC TACTACTCCA CCTCGCCGGC GGCGGTCACC
CGCAATCTGG TGATCATCGG CGGCCACGTC ACCGACAACG AGTCGACCAA CGAGCCGTCC
GGGGTGATCC GCGCCTTCGA CGTGCACGAC GGCAAGCTGG TGTGGAACTG GGACAGCGGC
AACCCGGACG AGACCGAGCC CCTGGCTCCC GGCAAGTTCT ATACCCGCAA CTCGCCGAAC
ATGTGGTCGC TGGCCAGCGT CGACGAGAAG CTCGGCCAGG TCTACCTGCC GCTGGGCAAC
CAGATGCCCG ACCAGTGGGG CGGCAACCGC ACCCCCGGTG CCGAGAAGTT CAGCGCCGGC
CTGGTGGCTC TCGACCTGAA CACCGGCAAG CTGCGCTGGA ACTACCAGTT CACCCACCAC
GACCTGTGGG ACATGGACGT CGGCAGCCAG CCGACCCTGC TCGACCTGAA GACCGCCGAT
GGCGTCAAGC CGGCGCTGAT CGCGCCGACC AAGCAGGGCA GCCTGTACGT GCTGGACCGC
CGCGACGGCA CGCCGATCGT GCCGATCCGC GAAGTGCCGG CGCCGCAGGG CGCGGTGGAG
GGCGACCATA CCGCGCCGAC CCAGGCGCGT TCCGACCTCA ACCTGCTGCG CCCGCCGCTG
ACCGAGCGCG ACATGTGGGG CAGCAGCCCG TTCGACCAGA TGCTCTGCCG CATCCAGTTC
CGCTCGCTGC GCTACGAGGG CCAGTACACC CCGCCGTCGG AGCAGGGCAG CCTGATCTAT
CCGGGCAACG TCGGGGTGTT CAACTGGGGC GGGGTGTCGG TCGACCCGGT GCGCCAGATC
CTCTTCACCA GCCCCAACTA CATGGCCTTC GTCTCGCAGA TGGTGCCGCG CGACAAGGTG
CCCAGCGGAA GCAAGCGCGA GGGCGAGACC AGCGGCGTGC AGCCGAACAC CGGCGCGCCC
TACGCGGTGA TCATGCATCC GTTCATGTCG CCCATCGGCC TGCCGTGCCA GGCGCCGTCC
TGGGGTGACG TGGCGGGTAT CGACCTGACC ACCGCCAAGG TCGTCTGGCA GCACAAGAAC
GGCACCAGCC GCGACAACAC CCCGGTGCCG ATCGGCCTCA CCGTCGGCGT ACCGAGCATG
GGCGGCTCGA TCACCACCGC CGGCGGCGTG GCCTTCCTCA GCGGCACGCT CGACCAGTAC
CTGCGCGCCT ACGACGTGAA GGACGGCAAG CAGCTCTGGC AGGCGCGCCT GCCGGCCGGC
GGCCAGGCCA CGCCGATGAG CTACACCGGC AAGGACGGTC GCCAGTACGT GCTGATCGTC
GCTGGCGGAC ACGGCTCCTT CGGCACCCGC ATGGGCGACT ACATCATCGC CTACGCCCTG
CCCAGGCAAT GA
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| Protein sequence | MSEGNHSRSR LLPSLLGLLI LLSGLALLAG GIKLASLGGS LYYLLAGIGL ALSGLLLLLG
KRAALGLYAL VLFASTVWAL WEVGLDWWQL VPRLALWFVF GLLLWLPWFR RPLLAEGPAP
LGTAALGVAV VLAGAAAVGS QFTNPGQIVG RIDRDSGMTS TAPAMPDGDW QAYGRTEFGD
RYSPLKQITP ANVGQLEEAW RIRTGDLPTA DDPLELTNEN TPLKVNGMLY ACTAHSKVLA
LDPDTGAEIW RFDPQIQSPV GFKGFAHMTC RGVSYYDEEQ YARSDVGAPP AALSEAGKAV
AASCPRRLFL PTADARLIAI NADNGKVCED FGVKGAVDLT AGIGPFTPGG YYSTSPAAVT
RNLVIIGGHV TDNESTNEPS GVIRAFDVHD GKLVWNWDSG NPDETEPLAP GKFYTRNSPN
MWSLASVDEK LGQVYLPLGN QMPDQWGGNR TPGAEKFSAG LVALDLNTGK LRWNYQFTHH
DLWDMDVGSQ PTLLDLKTAD GVKPALIAPT KQGSLYVLDR RDGTPIVPIR EVPAPQGAVE
GDHTAPTQAR SDLNLLRPPL TERDMWGSSP FDQMLCRIQF RSLRYEGQYT PPSEQGSLIY
PGNVGVFNWG GVSVDPVRQI LFTSPNYMAF VSQMVPRDKV PSGSKREGET SGVQPNTGAP
YAVIMHPFMS PIGLPCQAPS WGDVAGIDLT TAKVVWQHKN GTSRDNTPVP IGLTVGVPSM
GGSITTAGGV AFLSGTLDQY LRAYDVKDGK QLWQARLPAG GQATPMSYTG KDGRQYVLIV
AGGHGSFGTR MGDYIIAYAL PRQ
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