Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_34800 |
Symbol | |
ID | 4384351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3090172 |
End bp | 3090789 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639325364 |
Product | amino acid transporter LysE |
Protein accession | YP_790933 |
Protein GI | 116050250 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.000662816 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00481563 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGCTCT CCGTGGATCT GCTGCTGGCG TTCTCCCTGT TCGCCTTCGT CACCTCCGTC ACGCCCGGTC CGAACAACAC CATGCTGCTG GCCTCGGGGG TCAACTTCGG TTTCGTCCGC TCCATCCCGC ACATCCTCGG GATCAGTTGC GGCTTCTTCA TCATGGTGAT GGCGGTGGGC TTCGGCCTGG GCACGGTGTT CGAGGCCTAC CCGGTGCTGT ACACCATCCT GCGCTACGTC GGCGCGGCCT ACCTGCTGTA CCTGGCCTGG AAGATCGCCA CCTCCGGCCC GGCCGGCAAC GACCCGGAGG GACGTGGCAA GCCGTTGAGC TACTGGGGCG CGGCGGCGTT CCAGTGGGTC AACCCGAAGG CCTGGGTGAT GGCGGTCGGC GCCATCAGCA CCTACACCCC GTTGCAGGGC TACTTCACCA ACGTGGTGGT GATCTCGACG GTCTTCGCCC TGATCAACGC GCCGACCATC GGAATCTGGG CCGGTTTCGG CAGCATGCTG CGCAACGTGC TGCGCGATCC GCGCTGGCTG CGGGTGTTCA ACGTAGGGAT GGCGCTGCTG TTGGTCGCGT CGCTGTACCC GATCCTGGCG GAAAATCATT CGGCCTGA
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Protein sequence | MSLSVDLLLA FSLFAFVTSV TPGPNNTMLL ASGVNFGFVR SIPHILGISC GFFIMVMAVG FGLGTVFEAY PVLYTILRYV GAAYLLYLAW KIATSGPAGN DPEGRGKPLS YWGAAAFQWV NPKAWVMAVG AISTYTPLQG YFTNVVVIST VFALINAPTI GIWAGFGSML RNVLRDPRWL RVFNVGMALL LVASLYPILA ENHSA
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