Gene PA14_34800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_34800 
Symbol 
ID4384351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3090172 
End bp3090789 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content65% 
IMG OID639325364 
Productamino acid transporter LysE 
Protein accessionYP_790933 
Protein GI116050250 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.000662816 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00481563 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGCTCT CCGTGGATCT GCTGCTGGCG TTCTCCCTGT TCGCCTTCGT CACCTCCGTC 
ACGCCCGGTC CGAACAACAC CATGCTGCTG GCCTCGGGGG TCAACTTCGG TTTCGTCCGC
TCCATCCCGC ACATCCTCGG GATCAGTTGC GGCTTCTTCA TCATGGTGAT GGCGGTGGGC
TTCGGCCTGG GCACGGTGTT CGAGGCCTAC CCGGTGCTGT ACACCATCCT GCGCTACGTC
GGCGCGGCCT ACCTGCTGTA CCTGGCCTGG AAGATCGCCA CCTCCGGCCC GGCCGGCAAC
GACCCGGAGG GACGTGGCAA GCCGTTGAGC TACTGGGGCG CGGCGGCGTT CCAGTGGGTC
AACCCGAAGG CCTGGGTGAT GGCGGTCGGC GCCATCAGCA CCTACACCCC GTTGCAGGGC
TACTTCACCA ACGTGGTGGT GATCTCGACG GTCTTCGCCC TGATCAACGC GCCGACCATC
GGAATCTGGG CCGGTTTCGG CAGCATGCTG CGCAACGTGC TGCGCGATCC GCGCTGGCTG
CGGGTGTTCA ACGTAGGGAT GGCGCTGCTG TTGGTCGCGT CGCTGTACCC GATCCTGGCG
GAAAATCATT CGGCCTGA
 
Protein sequence
MSLSVDLLLA FSLFAFVTSV TPGPNNTMLL ASGVNFGFVR SIPHILGISC GFFIMVMAVG 
FGLGTVFEAY PVLYTILRYV GAAYLLYLAW KIATSGPAGN DPEGRGKPLS YWGAAAFQWV
NPKAWVMAVG AISTYTPLQG YFTNVVVIST VFALINAPTI GIWAGFGSML RNVLRDPRWL
RVFNVGMALL LVASLYPILA ENHSA