Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_34690 |
Symbol | |
ID | 4384361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3080972 |
End bp | 3081865 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325354 |
Product | LysR family transcriptional regulator |
Protein accession | YP_790923 |
Protein GI | 116050260 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0262778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.106193 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGCC TCAGCGGTTT CACCGTCTTC GTCCGCGTCG CCGAGACCCG CAGCATCGTC GGCGCCGCCC GGACCCTCGG CGTCAGCGCC TCGGCGGTGG GCAAGCGGGT CGCCCGCCTG GAAGAGAAGC TCGGCGTGCG CCTGTTCCAC CGCAGCACCC GCAGCATCAC CCTGACCGCC GAAGGCAGCC TGTTCCTCGA GCGCAGCCGG CGCATCCTGG CCGAGATCGA AGCCACCGAG CTGGAGCTGT CGCAAAGCCG CGAAACCCCG CGCGGGCGCC TGCGGGTCAG CCTGCCGCTG GTCAGCGGGC TGGTCCTGCC GACGCTCGCC GATTTCATGC AGGCCTATCC GGACATCGAG CTAGACCTCG ACTTCAGCGA CCGCGTGGTG GATGTCGTCG ACGAAGGCTT CGACGTGGTC CTGCGCACCG GCCAGCCGGT GGATTCGCGG CTGTCCATGC GCGAACTGGG CGAGTTCCAG TTGAAGCTGG TCGGCTCGCC GACCTACTTC GCCCGCCACG GCACGCCACG CTGCCCGGAA GACCTGCTGC GGCACACCTG CCTGCACTAC CGCTTCTCCA ACACCGGCCG CCTCGAGGAA TGGCCGCTGC GCCGCGCGGA CGGCGAAGCC CCGCCGCAGA TCCCGGTGTC GATGGTCTGC AACAACATCG AGACCCGCGT CTGCTTCGCC CTGCGCGACC AGGGCATCGC CTGCCTGCCG GACTTCTCGA TCCGCGAGGC GCTGCGCGAA GGGCGCCTGG TCAGCGTTCT CGACGCCTTC TGCGAGCGCC GCGCGCGGTT CTTCCTGCTC TGGCCGTCCG GCCGCCAGGT CTCGCCCAAG CTGCGCGCCT TCATCGACTT CGTCGCGCCA CGGGTGATCG CCACGCTGGG CTGA
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Protein sequence | MDSLSGFTVF VRVAETRSIV GAARTLGVSA SAVGKRVARL EEKLGVRLFH RSTRSITLTA EGSLFLERSR RILAEIEATE LELSQSRETP RGRLRVSLPL VSGLVLPTLA DFMQAYPDIE LDLDFSDRVV DVVDEGFDVV LRTGQPVDSR LSMRELGEFQ LKLVGSPTYF ARHGTPRCPE DLLRHTCLHY RFSNTGRLEE WPLRRADGEA PPQIPVSMVC NNIETRVCFA LRDQGIACLP DFSIREALRE GRLVSVLDAF CERRARFFLL WPSGRQVSPK LRAFIDFVAP RVIATLG
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