Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_34580 |
Symbol | |
ID | 4384369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3072186 |
End bp | 3073445 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325346 |
Product | hypothetical protein |
Protein accession | YP_790915 |
Protein GI | 116050268 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.797215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.181748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCC GCGTCCATCC CGAAGCCACC GCCGCCAGTC TCTCCGAAGG CGCCGACTAC GAACTGCTCG CCCAGCGTTT CCGACCGATC TTCGCGCGCA TCGCCGAAGG CGCCGTCGAG CGCGAACGGC AACGCGAACT GCCCCACGAG GCGATCGCCT GGCTCAAGCA GGCCGGCTTC GGCGCCGTGC GCGTGCCGCG CGAGCACGGC GGCGCCGGCG CCTCGCTGGC GCAATTGGTT CAGTTGCTGA TCGAACTGGC CGAGGCCGAC TCCAACATCA CTCAGGCCCT GCGCGGCCAC TTCGCCTTCG TCGAGGACCG TCTCAATGCC GAGCCCGGCC CTGGCCGCGA CCGTTGGCTG CGGCGCTTCG TCGAGGGCGA CCTGGTCGGC TGCGCCTGGA CCGAGGTCGG TTCGGTACGG CTGGGCGAAG TGCTCACCCG CGTCTCGCGC AAGGACGACG GTCGCTGGGT GGTGAACGGC AGCAAGTACT ACAGCACCGG CAGCCTCTTC TCCGACTGGA TCGATCTGTA TGCCCAGCGC GACGACACCG GCGCCGACGT GATCGCGGCG ATCCGCACCG ACCAGCCCGG CGTGCGCCAG AGCGACGACT GGGACGGCTT CGGCCAGCGC ACCACCGGCA GCGGCACATC GCTGTTCGAG GACGCCGAGG TGGAGGAAGA GAACCTCATC GACTTCGCCA GCCGCTTCAA GTACCAGACC GCGTTCTACC AGTTGGTCCT GCTCGCGGTG CTGGCCGGCA CCGGCCGCGC CGCCTTGCGC GACGTCGCCG CCGAGGTGCG CGGGCGGACC CGTATCTACA GCCACGGCAA TGCCCCGCGA GTCAGCCAGG ATCCCCAGGT GCAGCAGGTG GTCGGGCGCA TCGCCGCGCG CGTCTACGCC GCCGAGGCGG CCACCCTGCG CGCCGCCGAA GCGGCCCAGC GCGCCTACCT GGCGCGTTTC GTAGGCGACC CGCAGGCGGA GAAGGAGGCC AATGTCGCCG CCGAGATCGA ATCGGCCAAG GCCCAGGCGA TCGTCGCCGA ACTGGTGTTG CAGGCCACCA GCGAGCTGTT CGACGCCAGC GGCGCTTCCG CCGTCGGCCG CGGCAAGCAG CTCGACCGCC ACTGGCGCAA TGCGCGCACC GCCGCCTCGC ACAATCCCCT GATCTACAAG CAACGGATCG TCGGCGACTG GGAGATCAAC GGCAGCGAGC CGCCCTACGT CTGGCAGATC GGCAGCGGTC CGGCCACGGC GTCCCGCTGA
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Protein sequence | MNARVHPEAT AASLSEGADY ELLAQRFRPI FARIAEGAVE RERQRELPHE AIAWLKQAGF GAVRVPREHG GAGASLAQLV QLLIELAEAD SNITQALRGH FAFVEDRLNA EPGPGRDRWL RRFVEGDLVG CAWTEVGSVR LGEVLTRVSR KDDGRWVVNG SKYYSTGSLF SDWIDLYAQR DDTGADVIAA IRTDQPGVRQ SDDWDGFGQR TTGSGTSLFE DAEVEEENLI DFASRFKYQT AFYQLVLLAV LAGTGRAALR DVAAEVRGRT RIYSHGNAPR VSQDPQVQQV VGRIAARVYA AEAATLRAAE AAQRAYLARF VGDPQAEKEA NVAAEIESAK AQAIVAELVL QATSELFDAS GASAVGRGKQ LDRHWRNART AASHNPLIYK QRIVGDWEIN GSEPPYVWQI GSGPATASR
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