Gene PA14_34580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_34580 
Symbol 
ID4384369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3072186 
End bp3073445 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content70% 
IMG OID639325346 
Producthypothetical protein 
Protein accessionYP_790915 
Protein GI116050268 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.797215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.181748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC GCGTCCATCC CGAAGCCACC GCCGCCAGTC TCTCCGAAGG CGCCGACTAC 
GAACTGCTCG CCCAGCGTTT CCGACCGATC TTCGCGCGCA TCGCCGAAGG CGCCGTCGAG
CGCGAACGGC AACGCGAACT GCCCCACGAG GCGATCGCCT GGCTCAAGCA GGCCGGCTTC
GGCGCCGTGC GCGTGCCGCG CGAGCACGGC GGCGCCGGCG CCTCGCTGGC GCAATTGGTT
CAGTTGCTGA TCGAACTGGC CGAGGCCGAC TCCAACATCA CTCAGGCCCT GCGCGGCCAC
TTCGCCTTCG TCGAGGACCG TCTCAATGCC GAGCCCGGCC CTGGCCGCGA CCGTTGGCTG
CGGCGCTTCG TCGAGGGCGA CCTGGTCGGC TGCGCCTGGA CCGAGGTCGG TTCGGTACGG
CTGGGCGAAG TGCTCACCCG CGTCTCGCGC AAGGACGACG GTCGCTGGGT GGTGAACGGC
AGCAAGTACT ACAGCACCGG CAGCCTCTTC TCCGACTGGA TCGATCTGTA TGCCCAGCGC
GACGACACCG GCGCCGACGT GATCGCGGCG ATCCGCACCG ACCAGCCCGG CGTGCGCCAG
AGCGACGACT GGGACGGCTT CGGCCAGCGC ACCACCGGCA GCGGCACATC GCTGTTCGAG
GACGCCGAGG TGGAGGAAGA GAACCTCATC GACTTCGCCA GCCGCTTCAA GTACCAGACC
GCGTTCTACC AGTTGGTCCT GCTCGCGGTG CTGGCCGGCA CCGGCCGCGC CGCCTTGCGC
GACGTCGCCG CCGAGGTGCG CGGGCGGACC CGTATCTACA GCCACGGCAA TGCCCCGCGA
GTCAGCCAGG ATCCCCAGGT GCAGCAGGTG GTCGGGCGCA TCGCCGCGCG CGTCTACGCC
GCCGAGGCGG CCACCCTGCG CGCCGCCGAA GCGGCCCAGC GCGCCTACCT GGCGCGTTTC
GTAGGCGACC CGCAGGCGGA GAAGGAGGCC AATGTCGCCG CCGAGATCGA ATCGGCCAAG
GCCCAGGCGA TCGTCGCCGA ACTGGTGTTG CAGGCCACCA GCGAGCTGTT CGACGCCAGC
GGCGCTTCCG CCGTCGGCCG CGGCAAGCAG CTCGACCGCC ACTGGCGCAA TGCGCGCACC
GCCGCCTCGC ACAATCCCCT GATCTACAAG CAACGGATCG TCGGCGACTG GGAGATCAAC
GGCAGCGAGC CGCCCTACGT CTGGCAGATC GGCAGCGGTC CGGCCACGGC GTCCCGCTGA
 
Protein sequence
MNARVHPEAT AASLSEGADY ELLAQRFRPI FARIAEGAVE RERQRELPHE AIAWLKQAGF 
GAVRVPREHG GAGASLAQLV QLLIELAEAD SNITQALRGH FAFVEDRLNA EPGPGRDRWL
RRFVEGDLVG CAWTEVGSVR LGEVLTRVSR KDDGRWVVNG SKYYSTGSLF SDWIDLYAQR
DDTGADVIAA IRTDQPGVRQ SDDWDGFGQR TTGSGTSLFE DAEVEEENLI DFASRFKYQT
AFYQLVLLAV LAGTGRAALR DVAAEVRGRT RIYSHGNAPR VSQDPQVQQV VGRIAARVYA
AEAATLRAAE AAQRAYLARF VGDPQAEKEA NVAAEIESAK AQAIVAELVL QATSELFDAS
GASAVGRGKQ LDRHWRNART AASHNPLIYK QRIVGDWEIN GSEPPYVWQI GSGPATASR