Gene PA14_34490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_34490 
Symbol 
ID4380395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3065399 
End bp3066466 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content73% 
IMG OID639325340 
Producthypothetical protein 
Protein accessionYP_790909 
Protein GI116050274 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000897326 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.153318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACC CGACCCTGAG CGACTGGCTC GACCGCCAGG CCGACGCCCT CGACCGCGGC 
GACGCCGATC CCGCCGCGCT GCTGCCGCGC CTGGCCGCCG CCGGCGTGCT CGGCGTGGCG
GTGGAGGAAC GCCTCGGCGG CGCCGGCGGC ACGCTCGCCG ACGCGGTGGA GCGGGTGGCC
GCGGTGGCGG CGCGCTCGCT GACCGCGGCG TTCGTCTTCT GGGGCCAGCG CGCCTTCATC
GAGTACCTGT TGCAGAGTCC CAACCAGGAA CTGCGCCAAC GCCTGCTCGG CGACCTGCTG
GCCGGCCGCC TGGCCGGCGC CACCGGGCTG TCCAACGCGA TGAAGTTCCT TTCCGGGATC
GAGGCGCTGC AGGTGGTGGC GCACGCGGAG GAGGCCGGCT GGCGCCTGGA CGGTCGCCTG
CCGTGGGTGA CCAACCTGCG CAGTGGCGAT TTCGTGGTGG CGGCGGCGAT CGAACGAGGG
GAGGGTGGCA GTCCCTTCGT CCTGGCGATT CCCGAAGGCC TCGCCGGCTT GCAGCGCTCG
GCGGACCTGC GCCTGCTCGG CCTGCAATGC AGCAACACCG CCGCCCTTGA CCTGCGCGCG
GTGGCGGTCG GGCGCGACTG GCTGTTGCAC GACGACGCCC GGCAGTTCCT GCCACGGGTG
CGCCCGGCCT TCCTCGGCCT GCAATGCGGC ATGGCCATCG GCCTGGCGCG CCGCGCACTG
GACGAAGTGC AGCGGCACCT GGGCGGCAGT CGTTCGCTGC TGGATGGTGA GCTGGCGGCA
CAGCGCGAAA CCCTCGACGG ACACGTGGCG GCGCTGCACG CCGGACTGGC CAGCGGCGAG
TTCGCCAGCC AGCCGGCACG CCTGTTCCGC ATCCGCATCG GGCTCGCCGA AGCCGCCGCC
AATGCCGTGC AACTGGAGTT GCAGGCCAGC GGCGGCAAGG CCTACCTGAG CGAGCACGGC
GCCGGTTTCG CCCGCCGCTG GCGCGAGTCG GCGTTCGTCC CGATCGTTAC GCCGAGCCTG
GTGCAACTGC GCGCCGAACT GCAACGCCAG GCCGAGGCCA AGGCATGA
 
Protein sequence
MLDPTLSDWL DRQADALDRG DADPAALLPR LAAAGVLGVA VEERLGGAGG TLADAVERVA 
AVAARSLTAA FVFWGQRAFI EYLLQSPNQE LRQRLLGDLL AGRLAGATGL SNAMKFLSGI
EALQVVAHAE EAGWRLDGRL PWVTNLRSGD FVVAAAIERG EGGSPFVLAI PEGLAGLQRS
ADLRLLGLQC SNTAALDLRA VAVGRDWLLH DDARQFLPRV RPAFLGLQCG MAIGLARRAL
DEVQRHLGGS RSLLDGELAA QRETLDGHVA ALHAGLASGE FASQPARLFR IRIGLAEAAA
NAVQLELQAS GGKAYLSEHG AGFARRWRES AFVPIVTPSL VQLRAELQRQ AEAKA