| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_34330 |
|---|
| Symbol | |
|---|
| ID | 4380406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 3052936 |
|---|
| End bp | 3054171 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639325329 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_790898 |
|---|
| Protein GI | 116050285 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00153013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.203445 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGCG CTAACGCTTC AGAACTCACC ACCGACATCG CCGTGATCGG CGGCGGCGCG
GCCGGCATCG GCGTGATCGC CAGCCTGCTG AAACGTTCGC CGGGGTTGCG TATCAGCCTG
ATCGAGCCGG CGGACACCCA CTACTACCAA CCGGGCTGGA CCCTGGTCGG TGGCGGCGCC
TACGCCCAGG GCGACACCGC GCGGCCGATG GCCGGGCTGG TCCCGCCCGG CGTGGAGTGG
CTGCGCACCC GTGTCGAGCG GGTCGACCCC GAGGCGCGCC GGCTACTGCT GGAGAGCGGC
GGCAGCCTGG AATACCGCAA CCTGATCGTC TGCCCCGGCC TGCGCCTGGC CTGGGAGCGC
ATCGAGGGCC TGGAGGAGAC CCTCGGGCGC AACGGCGTCA CCTCCAACTA CCGCTACGAC
CTGGCGCCCT ACACCTGGGA GCTGGTGCGC GGCCTGCGTG GCGGCAAGGC GCTGTTCACC
CAGCCGGCGA TGCCGATCAA GTGCGCCGGG GCGCCGCAGA AAGCCATGTA CCTGTCCTGC
GACCACTGGC TGCGGGAGGG CGTGCTGCAA GACATCGAGG TCGAGTTCGA CCTGGCCGGC
GCGGCGTTGT TCGGCGTCGC CGATTTCGTT CCGCCGCTGA TGGAATACGT GCGCAAGTAT
TCGGCCGAGC TGGCGTTCAA TTCCAACCTG GTGAAGGTCG ACGGCGCGGC GCGCAAGGCC
TGGTTCGAGG TGAAGGACGC CGACGGCAAC AGCAATCTGG CGGAAAAGGA CTTCGACCTG
CTGCACGTGG TGCCGCCGCA ACTGCCGCCG ACCTTCGTCG CCGCCAGCGG CCTGGGCGAC
GCGGCCGGCT GGTGCGAAGT CGACCCGGCG ACCCTGCAAC ATGTCCGCCA TGGCGAGATC
TTCGCCCTCG GCGATGTCTG CGGCACCGCC AACGCGAAGA CCGCGGCGGC GGCGCGCAAG
CAGATCGTGG TGGTGGCCGA GAACCTTCTC GGCCTGCGCA GCGGCCGTGG CCTGCCGCTG
CGCTACGACG GTTACGGCGG TTGCCCGCTG ACCGTCGAGC GCGGCCGGGT GGTGCTGGCG
GAGTTCGGCT ACGCCGGCAA GCTGCTGCCG ACCTTCCCGC TGGAGCCCAC CGCGGCCAGC
CGCTTCGCCT GGCTGCTCAA GCGCCACGTA CTGCCCTGGG TGTACTGGAA CGCCATGCTC
AAGGGCCGGG AGTGGCTGGC GCGGCCGGGG CGCTAG
|
|---|
| Protein sequence | MQSANASELT TDIAVIGGGA AGIGVIASLL KRSPGLRISL IEPADTHYYQ PGWTLVGGGA
YAQGDTARPM AGLVPPGVEW LRTRVERVDP EARRLLLESG GSLEYRNLIV CPGLRLAWER
IEGLEETLGR NGVTSNYRYD LAPYTWELVR GLRGGKALFT QPAMPIKCAG APQKAMYLSC
DHWLREGVLQ DIEVEFDLAG AALFGVADFV PPLMEYVRKY SAELAFNSNL VKVDGAARKA
WFEVKDADGN SNLAEKDFDL LHVVPPQLPP TFVAASGLGD AAGWCEVDPA TLQHVRHGEI
FALGDVCGTA NAKTAAAARK QIVVVAENLL GLRSGRGLPL RYDGYGGCPL TVERGRVVLA
EFGYAGKLLP TFPLEPTAAS RFAWLLKRHV LPWVYWNAML KGREWLARPG R
|
|---|
| |