| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_34070 |
|---|
| Symbol | |
|---|
| ID | 4385124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3029164 |
|---|
| End bp | 3029709 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639325309 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_790878 |
|---|
| Protein GI | 116050305 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0502886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.0617525 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGA GTACGCAGCA CAAGCTGGAC CGGGTGCGCC CGCCGCGCGT GCAGATCACC
TACGACGTCG AGATCGGCAA CGCCATCGAG AAGAAGGAGC TGCCCCTGGT GGTCGGCATC
CTCGCCGACC TCTCCGGCAA GCCGGATACC CCGCCGGCGA AGCTGGTCGA ACGGCGTTTC
GTCGACATCG ACCGCGACAA CTTCAACGAG ATCCTCTCCT CCATCTCTCC CCGCGCCACC
CTGCAGGTCG ACAACACCAT CAGCGGCGAC GACAGCAAGC TGAACGTCGA GCTGCGCTTC
AACCACATCG AGGACTTCGA CCCGGTCAAC CTGGTGAAGC AGGTGGTCCC GTTGCGTCGC
CTGTTCGAAG CGCGCCAGCG CCTGCGCGAC CTGCTGACCA AGCTCGACGG CAACGACGAC
CTCGACCAGT TGCTGCAGGA CGTGGTGGCC AACACCGAAG GCCTGCAGGA AATCAAAGCG
GCCCGCCCGG AAGCCGAAGC GGCCCCGGCC GGCGACAGCG AACCCCCGGC CGACCAGCCG
GCCTGA
|
|---|
| Protein sequence | MAESTQHKLD RVRPPRVQIT YDVEIGNAIE KKELPLVVGI LADLSGKPDT PPAKLVERRF
VDIDRDNFNE ILSSISPRAT LQVDNTISGD DSKLNVELRF NHIEDFDPVN LVKQVVPLRR
LFEARQRLRD LLTKLDGNDD LDQLLQDVVA NTEGLQEIKA ARPEAEAAPA GDSEPPADQP
A
|
|---|
| |