Gene PA14_33940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_33940 
Symbol 
ID4380436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3017037 
End bp3017573 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID639325299 
Producthypothetical protein 
Protein accessionYP_790868 
Protein GI116050315 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.000881244 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.151647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAT CCGGCAAGCT CGACCTGGTT CGTGGCGACA GCCATCTCGC TGGTAACCTG 
CTCGACGGCA GCCTGGAAGG TCCGTTGCGC ATCGACGAGC ACGACAGGCC GCAGGCCAGC
CTCGGCTACC GGCAGGGCCA GTTGCACGGC GCCAGCACCC TGTTCCATCC CAACGGCAAG
GTCTCCGCGC AACTCGCCTT CGTCGACGGC AAGCTGCACG GGCCGGCCAG TTTCCATGCC
GCGGAAGGCT GGTTGCAGCG CAAGGCGCAC TACCGCAACG GGCTGCTCCA CGGCGAAGCG
CTCAACTATT TCGCCAACGG CCAGATGGCC GAGCGCGAGC ATTACCGCGA CGGCGTGCGC
GACGGGGTCT ACCAGCGCTT CCATGGCAAT GGCCAACTGG CCTTCGACGG ACGCTACCTG
AACGGCCAGC TACTGGACGG CGCTCAGCCG TTCGCCGATG ACGGCCGGCC GCTGGACAGC
GAGGGCAGGC CCATGGCGCG CTGGCGCTGG TGGTGGATCA GGCTGGCGGA GCCCTAG
 
Protein sequence
MAASGKLDLV RGDSHLAGNL LDGSLEGPLR IDEHDRPQAS LGYRQGQLHG ASTLFHPNGK 
VSAQLAFVDG KLHGPASFHA AEGWLQRKAH YRNGLLHGEA LNYFANGQMA EREHYRDGVR
DGVYQRFHGN GQLAFDGRYL NGQLLDGAQP FADDGRPLDS EGRPMARWRW WWIRLAEP