Gene PA14_33860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_33860 
SymbollldA 
ID4380444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3008839 
End bp3009990 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content69% 
IMG OID639325291 
ProductL-lactate dehydrogenase 
Protein accessionYP_790860 
Protein GI116050323 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.14557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA TCACCGATAT CGAAGACCTG CGCCGCCTGG CGCGCAAGCG CGTGCCGCGG 
ATGTTCTACG ACTACGCCGA CTCCGGTTCC TGGAGCGAAG GCACCTACCG CGCCAACCAG
GACGACTTCG CCGCGATCAA GCTGCGCCAG CGGGTCGCGC GGAATATCGA GAACCGCTCG
CTGCGCACCC GCATGCTCGG CCAGGAGATG GCCATGCCGG TGGCCATCGC GCCCACCGGG
CTGGCCGGCA TGCAGCATGC CGACGGCGAG ATCCTCGCCG CCCGCGCCGC CGCCGAGTTC
GGCGTGCGCT ACACCCTGTC GACCATGAGC ATCTGTTCCC TGGAGGACAT CGCCACGGAA
GTCGGCCAGC CGTTCTGGTT CCAGCTCTAC GTGATGCGCG ACCGCGATTT CATCGAACGC
CTGATCGACC GTGCCAAGGC CGCCGGCTGC GACGCGCTGG TGCTGACCCT CGACCTGCAG
ATCATCGGCC AGCGCCACAA GGACCTGAAG AACGGCCTCT CGGCGCCGCC GCGGCCGACC
CTGGCCAACC TGCTGAACAT CGCCACCAAG CCGCGCTGGG CGCTGGGCAT GCTCGGCACC
CGGCGTCGCG GTTTCGGCAA CATAGTCGGG CACGTCAAGG GCGTCGACGA CATGGGCTCG
CTGTCCGAGT GGACCGCCCG CCAGTTCGAC CCGCGGCTGA ACTGGGGCGA CGTCGAATGG
ATCAAGCGCC GCTGGGGCGG CAAGCTGGTG CTCAAGGGCA TCCTCGATGC CGAGGATGCG
CGGCTGGCCG CCGACTCCGG CGCCGATGCG CTGGTCGTCA GCAACCATGG CGGACGCCAG
CTGGATGGCG CGCCCTCGAC CATCAGCGCG CTGCCGGCGA TCGTCGAGGC GGTGGGCGAG
CGCATCGAGG TCTGGCTCGA CAGCGGCATC CGTTCCGGGC AGGACGTGCT CAAGGCCATC
GCCCTCGGTG CGCGCGGGAC CATGATCGGC CGTCCCTATC TCTACGGGCT GGGCGCGCTG
GGTCAGGCCG GGGTGACGCG GGCGCTGGAG ATCATCGCTC GTGAGCTGGA CCTGACCATG
GCCTTCTGCG GCCATACCGA CATCCGCGAG GTCGGCCGGG ACATCCTGTT GCCGGGAAGC
TACCCGCGAT AG
 
Protein sequence
MSVITDIEDL RRLARKRVPR MFYDYADSGS WSEGTYRANQ DDFAAIKLRQ RVARNIENRS 
LRTRMLGQEM AMPVAIAPTG LAGMQHADGE ILAARAAAEF GVRYTLSTMS ICSLEDIATE
VGQPFWFQLY VMRDRDFIER LIDRAKAAGC DALVLTLDLQ IIGQRHKDLK NGLSAPPRPT
LANLLNIATK PRWALGMLGT RRRGFGNIVG HVKGVDDMGS LSEWTARQFD PRLNWGDVEW
IKRRWGGKLV LKGILDAEDA RLAADSGADA LVVSNHGGRQ LDGAPSTISA LPAIVEAVGE
RIEVWLDSGI RSGQDVLKAI ALGARGTMIG RPYLYGLGAL GQAGVTRALE IIARELDLTM
AFCGHTDIRE VGRDILLPGS YPR