| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_33800 |
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| Symbol | |
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| ID | 4380449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3002922 |
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| End bp | 3003401 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639325286 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_790855 |
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| Protein GI | 116050328 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0000282652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.00445082 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGAAAACC ATTATCGGGA GCTGCTGCGA TTCCTCAGTG CCAGGCTCGG GGATCGACAC
GCAGCGGCGG ATGTCGCCCA CGACGCGTAT TTGCGCGTTC TGGAGCGCTC CAGTCAAGCG
CAGATCGAGC ATCCGAAGGC TTTTCTGTAC CGGACGGCGC TCAACCTGGC GGTGGACGAG
CACCGTCGCA GCCGGGTGCG CCGGGCGGAA CCCCTGGAGG TCCTGGACGA CGAGGAGGGC
CTGGCCAGTC CCTCGCCGCA GACGGTGGTC GACCAGGGGC AGCGCCTGGA CAACCTGCAG
CGCGCGCTGG CCGAGTTGCC GGCCATCTGC CGCAGTTCGT TCCTGTTGCG CAAGCTGGAC
GGCCTGTCCC ATTCGCAGAT CGCCGAACAT CTCAATATTT CCCGCAGCCT GGTGGAAAAG
CACATCGTCA ACGCGATGAA GCACTGTCGG GTGCGCATGC GCGAATGGGA AGCCGACTGA
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| Protein sequence | MENHYRELLR FLSARLGDRH AAADVAHDAY LRVLERSSQA QIEHPKAFLY RTALNLAVDE
HRRSRVRRAE PLEVLDDEEG LASPSPQTVV DQGQRLDNLQ RALAELPAIC RSSFLLRKLD
GLSHSQIAEH LNISRSLVEK HIVNAMKHCR VRMREWEAD
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