| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_33690 |
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| Symbol | pvdE |
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| ID | 4380459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2988709 |
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| End bp | 2990358 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639325276 |
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| Product | pyoverdine biosynthesis protein PvdE |
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| Protein accession | YP_790845 |
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| Protein GI | 116050338 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00697095 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00612682 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCAATC CCAAGCGCGG CGCCATTCGC GAACTGCTCG CCCTGCTCAG GCCCTTTCGA
GCGATCGTGG CCGTCTCCAT AGCACTGGGC ATGGCCGGCG GCCTTGCCAT CACCCTGCTG
CTGGCCAGCA TCAACAACGC CTTGCACTCG GAAAACGGCC TCGGCCAAGG CGTCCTGCTG
TCGTTCGGCG GACTCTGCCT GCTGGCATTG GTCAGTTCGA TCGTCTCCGA CATCGGTACC
AGCTACGTCG GCCAACACAT CATCGCGAAG CTGCGCAAGG AACTCGGCGA GAAAGTCCTC
TCGGCGCCCA TCGAGCAGAT CGAGCGCTAC CGGACCCACC GTCTCATTCC GGTACTGACA
CACGACATTG ACACCATCAG CGACTTCTCC TTTTCCTTCA CCCCACTGGC CATAGCCCTG
ACCATCACTT TCGGCTGCCT GGGTTACCTC GCCTACCTAT CGGTCCCGAT GTTCCTGCTG
ACAGTCGTCG CCATCGTCAT CGGCACGGCA GCCCAGTACC TGGCGCGCTC CCGCGGTTTC
AAAGGGTTCT ATGCCGCCCG CGATCTCGAA GACGAATTGC AGAAGCACTA CACCGCCATC
GCTTCGGGCG CGAAGGAACT GCGCATCCAC CGCCCCCGTC GCTATCGCAT GCACACCGGC
CGCATCAGCG AAACCGCGAA CAACATCCGC GACCTCCACA TCAGCTCCAT CAATATATTC
ATCCTGGCCA AGACCTTCGG CTCGATGCTG TTCTTCGTGG TGATCGGTCT GGCGCTTACG
CTCCAGGCCT ACTGGCCTTC GTCCAATCCG GCCGCCATCA CTGGCTTCGT GATGGTCCTG
CTGTACATGA AGGGACCACT CGAACAGGTG GTGACCATCC TTCCCATCGT CAGCCGCGCC
CAGGTCGCCT TCCAGCGGGT CGCCGAACTT TCCGAGCGTT TTTCCTCTCC CGAACCCCAT
CTTCTGCTCA GCGAACAGGA GGCCCCGGAC AAGACCGTCG ACAGCCTGGA ACTGCGCGAC
GTTCGCTACA GCCCCCCCGC CGTCGAAGGC AGCGAACCGT TCCATCTGGG CCCTATCAAT
CTGCGTATCG CCCAAGGTGA CATCGTCTTC ATCGTCGGCG AGAACGGCTG CGGCAAGACG
ACCCTGATCA AGCTGCTGCT CGGCCTCTAT CGCCCGCAGT CCGGCGAGAT CCTTCTCAAC
GGAGAACCGG TCAGCGCGGA GACCCGCGAC GATTACCGCC AGCTCTTCAG CACCATCTTC
GCCGACTACT ACCTCTTCGA CGACCTGGTC CAGGGCAAGC AGGCTTCGTT GCAGAACGCG
ACCCAATATC TGCAACGCCT GGAAATCGCC CACAAGGTCA GCGTCATGGA CGGCAACTTC
AGCACCACCG ATCTCTCCAC CGGGCAGCGC AAGCGCCTTG CGCTGATCAA TGCCTGGCTC
GAAGAGCGGC CGGTCCTGGT CTTCGACGAA TGGGCCGCAG ACCAGGACCC GGCTTTCCGC
AGGGTCTTCT ACACCGAACT GTTGCCGGAC CTGAAGCGCC AGGGCAAGAC CATCATCGTG
ATCAGCCACG ATGATCGCTA TTTCGAAATG GCGGACCAGT TGATAAGGCT CTCGGCAGGC
AAGGTCGTCA AGGAAACCGA GACGGCGTGA
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| Protein sequence | MTNPKRGAIR ELLALLRPFR AIVAVSIALG MAGGLAITLL LASINNALHS ENGLGQGVLL
SFGGLCLLAL VSSIVSDIGT SYVGQHIIAK LRKELGEKVL SAPIEQIERY RTHRLIPVLT
HDIDTISDFS FSFTPLAIAL TITFGCLGYL AYLSVPMFLL TVVAIVIGTA AQYLARSRGF
KGFYAARDLE DELQKHYTAI ASGAKELRIH RPRRYRMHTG RISETANNIR DLHISSINIF
ILAKTFGSML FFVVIGLALT LQAYWPSSNP AAITGFVMVL LYMKGPLEQV VTILPIVSRA
QVAFQRVAEL SERFSSPEPH LLLSEQEAPD KTVDSLELRD VRYSPPAVEG SEPFHLGPIN
LRIAQGDIVF IVGENGCGKT TLIKLLLGLY RPQSGEILLN GEPVSAETRD DYRQLFSTIF
ADYYLFDDLV QGKQASLQNA TQYLQRLEIA HKVSVMDGNF STTDLSTGQR KRLALINAWL
EERPVLVFDE WAADQDPAFR RVFYTELLPD LKRQGKTIIV ISHDDRYFEM ADQLIRLSAG
KVVKETETA
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