| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_33220 |
|---|
| Symbol | |
|---|
| ID | 4380517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2907021 |
|---|
| End bp | 2908025 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639325237 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_790806 |
|---|
| Protein GI | 116050377 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0256894 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGT TGCAAGGCAA ATGGCCGCGC CTGGCCACCC TGCTGGCGGT GCTGGTGGCG
GCGGCACTGG TGTTCCTCGC CTGGGAACGC TACACCCGCA CGCCGTGGAC CCGTGACGCG
CGGGTCCGCG CCGATGTGGT GACGCTGTCG GCGGACGTTT CCGGGCTGAT CACCCGGTTG
CCGCTGAGCG ACAACCAGCC CGTGGAGAAG GGCGCGCTGC TGCTCAGCAT CGACCCGGCG
CGCTATGAAC TGGCGGTGCT GCGCGCCGAG CGCGCGGTGA ACGTGGCGCG GGCGGCGCTG
GGCGAGTCGC GCGCGGCGAT CGAGGCCAGC CAGGCCCAGT TGCGCCAGCG CCGCAGCGAG
GCGCAGCGGC GCTCGGCATT GCAGAAGCGC TCGATGCTAT CGGTGGAAGA GAACGAAAAG
GCCCAGACCG ACGTCAGCCT GGCCCAGGCC GAGTTGCTGA GGAACCAGGC CAGCCTCGGC
CTGGCCCAGG CCAACGTGGA GCTTGCCGAA GCCGCCTTGC AGCAGGCCCG TCTCGACCTC
GAACGTACCC AGGTACGCGC CCCGGTCAGC GGCTACGTGA CCAATCTGCA GACCCGCGAA
GGCGACTACG CCCACGCCGG GGTGCCATTG CTGGCGCTGG TGGACCGCGA TTCGTTCTAT
GTCAGCGGAT ACTTCGAGGA GACCAAGTTG CCGGGCATCC GCGTCGGCAG CCGGGCGCGG
GTGGAACTGA TGAGCGGCGA GCGCTTCGAC GGGCGCGTGC AGAGCATCGC CCATGCCATC
ACCGACCGGG AGAATGCCGA GGGCTCGCGC CTGCTGGCGA ACATCAACCC GAGCTATACC
TGGGTCAAGC TGGCCCAGCG AATTCCGGTG CGCATCGCCA TCGATCCCGC CTATCGCCAG
CGCAACACCT TGCGCGCCGG CGTGACCGCG ACCATCCGGG TGCTGCCCGC GGAGGACACC
GCGAAAGTCG ATTCCGCGGC GCCCGGGACT GCCGTGCGGC CTTGA
|
|---|
| Protein sequence | MNLLQGKWPR LATLLAVLVA AALVFLAWER YTRTPWTRDA RVRADVVTLS ADVSGLITRL
PLSDNQPVEK GALLLSIDPA RYELAVLRAE RAVNVARAAL GESRAAIEAS QAQLRQRRSE
AQRRSALQKR SMLSVEENEK AQTDVSLAQA ELLRNQASLG LAQANVELAE AALQQARLDL
ERTQVRAPVS GYVTNLQTRE GDYAHAGVPL LALVDRDSFY VSGYFEETKL PGIRVGSRAR
VELMSGERFD GRVQSIAHAI TDRENAEGSR LLANINPSYT WVKLAQRIPV RIAIDPAYRQ
RNTLRAGVTA TIRVLPAEDT AKVDSAAPGT AVRP
|
|---|
| |