Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_33170 |
Symbol | |
ID | 4380520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2903336 |
End bp | 2904250 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639325234 |
Product | putative transcriptional regulator |
Protein accession | YP_790803 |
Protein GI | 116050380 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.162388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0024503 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCTGC GCTTCGACGA TATCGAAGCC TTCCTCAACG TCGCCGAACT CAACAGCGTG ACGTCGGCGG CCGAGCGCAT GAGCCTGTCC AAGTCGGTGA TCAGCAAGCG CGTCAGCGAT CTCGAACGAC GCCTCGGCGT CCGCCTGCTC TATCGCACCA CGCGCAACGT CGAGCCGACC GAGGCCGGGC ATTTCTTCTA CAAGGCCGCC AAGGCCTCGC TGCAGGAACT CAACAACGCC GCGGAGATCG TCGCCCTGCG CGAGAACGAC CTGTGCGGCG AATTGCGCAT CGTCACCCCG ATGAGCTTCG GCACCCTCTG GCTGTCGCCG ATCATCGCCG ACTTCATGAG CCAGCACCCG CGCCTGGAGA TCGTCCTGCA GATGGACGAC CGCCTCACCG ACTTCGAGAA GGAAGGCTAC GACCTGAGCA TCCGCGTCAC CCGCCTGGAC GACAGTTCGC TGATCGCCCG GCCGCTGGCC AACAGCCAGC GGGTGGTCTG CTGCAGCCCC GACTACGCGG AACGCCACGG CACGCTGGAC ACCCTCGAAC AACTGATGCA GCACGAGTGC CTGGGCTACA ACAACGCCAC GCCGAGCCAG GTCTGGACCT TCGAACCGGC GTTCCCCGGT GCCAAGCCCC GCGCCGTCTC GCCACGCGGA CGCTTCAGCA GCAACAACGG CCAGGCCATG CGCGATGCCG CCCTGCGCGG CCAGGGATTG GCGTTGCTGC CGCTGTTCAT CGTCGCCGAG GACCTCAAGA ACGGCCGCCT GGTGGACGCC GCGCCCAGCC TGCGCCCACT CGACGACGTG ATCTACGCGA TGTATTCGCG GGCGGCGGCG ATGTCGCCGA AGGTCAAGGC GTTCATCCAG CATCTCCAGC AGGCGCTGTC GATCCCGCCC TGGGGCAACG GCTGA
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Protein sequence | MSLRFDDIEA FLNVAELNSV TSAAERMSLS KSVISKRVSD LERRLGVRLL YRTTRNVEPT EAGHFFYKAA KASLQELNNA AEIVALREND LCGELRIVTP MSFGTLWLSP IIADFMSQHP RLEIVLQMDD RLTDFEKEGY DLSIRVTRLD DSSLIARPLA NSQRVVCCSP DYAERHGTLD TLEQLMQHEC LGYNNATPSQ VWTFEPAFPG AKPRAVSPRG RFSSNNGQAM RDAALRGQGL ALLPLFIVAE DLKNGRLVDA APSLRPLDDV IYAMYSRAAA MSPKVKAFIQ HLQQALSIPP WGNG
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