Gene PA14_33170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_33170 
Symbol 
ID4380520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2903336 
End bp2904250 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID639325234 
Productputative transcriptional regulator 
Protein accessionYP_790803 
Protein GI116050380 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.162388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0024503 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCTGC GCTTCGACGA TATCGAAGCC TTCCTCAACG TCGCCGAACT CAACAGCGTG 
ACGTCGGCGG CCGAGCGCAT GAGCCTGTCC AAGTCGGTGA TCAGCAAGCG CGTCAGCGAT
CTCGAACGAC GCCTCGGCGT CCGCCTGCTC TATCGCACCA CGCGCAACGT CGAGCCGACC
GAGGCCGGGC ATTTCTTCTA CAAGGCCGCC AAGGCCTCGC TGCAGGAACT CAACAACGCC
GCGGAGATCG TCGCCCTGCG CGAGAACGAC CTGTGCGGCG AATTGCGCAT CGTCACCCCG
ATGAGCTTCG GCACCCTCTG GCTGTCGCCG ATCATCGCCG ACTTCATGAG CCAGCACCCG
CGCCTGGAGA TCGTCCTGCA GATGGACGAC CGCCTCACCG ACTTCGAGAA GGAAGGCTAC
GACCTGAGCA TCCGCGTCAC CCGCCTGGAC GACAGTTCGC TGATCGCCCG GCCGCTGGCC
AACAGCCAGC GGGTGGTCTG CTGCAGCCCC GACTACGCGG AACGCCACGG CACGCTGGAC
ACCCTCGAAC AACTGATGCA GCACGAGTGC CTGGGCTACA ACAACGCCAC GCCGAGCCAG
GTCTGGACCT TCGAACCGGC GTTCCCCGGT GCCAAGCCCC GCGCCGTCTC GCCACGCGGA
CGCTTCAGCA GCAACAACGG CCAGGCCATG CGCGATGCCG CCCTGCGCGG CCAGGGATTG
GCGTTGCTGC CGCTGTTCAT CGTCGCCGAG GACCTCAAGA ACGGCCGCCT GGTGGACGCC
GCGCCCAGCC TGCGCCCACT CGACGACGTG ATCTACGCGA TGTATTCGCG GGCGGCGGCG
ATGTCGCCGA AGGTCAAGGC GTTCATCCAG CATCTCCAGC AGGCGCTGTC GATCCCGCCC
TGGGGCAACG GCTGA
 
Protein sequence
MSLRFDDIEA FLNVAELNSV TSAAERMSLS KSVISKRVSD LERRLGVRLL YRTTRNVEPT 
EAGHFFYKAA KASLQELNNA AEIVALREND LCGELRIVTP MSFGTLWLSP IIADFMSQHP
RLEIVLQMDD RLTDFEKEGY DLSIRVTRLD DSSLIARPLA NSQRVVCCSP DYAERHGTLD
TLEQLMQHEC LGYNNATPSQ VWTFEPAFPG AKPRAVSPRG RFSSNNGQAM RDAALRGQGL
ALLPLFIVAE DLKNGRLVDA APSLRPLDDV IYAMYSRAAA MSPKVKAFIQ HLQQALSIPP
WGNG