| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_33040 |
|---|
| Symbol | gcvT2 |
|---|
| ID | 4380530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2891911 |
|---|
| End bp | 2893032 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639325224 |
|---|
| Product | glycine cleavage system protein T2 |
|---|
| Protein accession | YP_790793 |
|---|
| Protein GI | 116050390 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0000417127 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.000519847 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAG AAACCCTCGC CAAGACGCCC CTGCACGCCC TGCACCTGGA ACTGGGGGCG
AAGATGGTGC CCTTCGCCGG CTACGACATG CCGGTGCAGT ACCCGGCCGG GGTGCTCAAG
GAGCACCTGC ACACCCGCGA GCAGGCCGGT CTGTTCGATG TCTCGCACAT GGGCCAGATC
CGCCTGGTGG GCGCCGATGC GGCGCTGGCC CTGGAAAGCC TGGTGCCGGT GGACATCCTC
GACCTGCCGG TGGGCCAGCA GCGCTACGCG TTGTTCACCG ACGAGCAGGG CGGGATCCTC
GACGACCTGA TGGTGGCCAA CCTCGGCGAT TGCCTGCTGC TGGTGGTCAA CGCCGCCTGC
AAGCACCAGG ACCTGGCGCA CCTGCGTCGT CACCTGGAGG GCCGTTGCAG CGTCGAGCCG
CTGTTCGAGG AGCGTGCCTT GCTCGCCCTC CAGGGACCGG CGGCGGTGCG GGTGCTGGAG
CGCCTGGCGC CGCAGGTGGC GCAAATGACC TTCATGCAGT TCGCCCGTGT CGAGCTGCTC
GGCCAGGACT GCTACGTCAG CCGCTCCGGC TATACCGGTG AAGACGGCTA CGAGATCTCC
GTGCCCGCCG CCCATGCCGA GGCCCTGGCG CGGCGCCTGC TGGCCGAGCC GGAAGTGGCG
CCGATCGGCC TCGGCGCGCG CGACTCGCTG CGCCTGGAAG CCGGCCTGTG CCTCTACGGC
CACGACATGG ACAGCGCCAC CACGCCGGTC GAAGCCAGCC TCGGCTGGGC CATTTCCAAG
GCGCGTCGCG CCGATGGCGT GCGCGCCGGC GGCTTCCCCG GCGCCGAGCG GATCTTTGCC
CAGCAGGCGC AGGGCGTTGC CAGCAAGCGC GTCGGTTTCC TGCCGCAGGG GCGGATGCCG
GTGCGCGAGG GCGCCGAGAT CGTCGATGCC CAGGGCCGGG CGATCGGCAA GGTCAGCAGC
GGCGGTTTCG GTCCGAGCCT CAACGCGCCG TTGGCCATGG GCTACGTGCC GAACGAACTG
GCCGGCCTGG GCAGCGAGGT GACGGCGATG GTGCGCGGCA AGCCGGTGAC CCTGGTGGTC
AGCAAGATGC CCTTCGTGGC GCAGCGCTAC TACCGCGGTT GA
|
|---|
| Protein sequence | MTAETLAKTP LHALHLELGA KMVPFAGYDM PVQYPAGVLK EHLHTREQAG LFDVSHMGQI
RLVGADAALA LESLVPVDIL DLPVGQQRYA LFTDEQGGIL DDLMVANLGD CLLLVVNAAC
KHQDLAHLRR HLEGRCSVEP LFEERALLAL QGPAAVRVLE RLAPQVAQMT FMQFARVELL
GQDCYVSRSG YTGEDGYEIS VPAAHAEALA RRLLAEPEVA PIGLGARDSL RLEAGLCLYG
HDMDSATTPV EASLGWAISK ARRADGVRAG GFPGAERIFA QQAQGVASKR VGFLPQGRMP
VREGAEIVDA QGRAIGKVSS GGFGPSLNAP LAMGYVPNEL AGLGSEVTAM VRGKPVTLVV
SKMPFVAQRY YRG
|
|---|
| |