| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_32940 |
|---|
| Symbol | |
|---|
| ID | 4380536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2881131 |
|---|
| End bp | 2882666 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639325217 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_790786 |
|---|
| Protein GI | 116050396 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0000186487 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCC ACGTCTCCTT CATCGACCGT GTCGGCATCA CCCAGGAGGT GCTGGCGCTG
CTGGGCGGGC GCAACCTGAA CCTGGACGCG GTGGAAATGG TGCCGCCGAA CGTCTACATC
GACGCGCCGA CCCTCAGTCC CGAAGTGCTG GAGGAACTGC GCGCAGCGCT GCTGGGCATC
CGTGGCGTGC AGGCGATGAC CGTGGTCGAC ATCCTTCCCG GCCAGCGCCG CCGCTTGCAG
CTCGATGCGT TGCTGGCGGC GATGGCCGAT CCGGTGCTGG CGGTGGACGG CAAGGGCCTG
GTGCTGCTGG CCAACCCGGC CTTCAGCGAG CGCTGCGGAC GCGACCCGGC CGGCGAGCGG
CTGGCCAGCC TGTTCGACGA TGAAACCCTG GAGGATGCGC TGGTCGAGCA GGGCTTCCGC
CTGCCGCTGC GCGAAGTGAC CTTCATGGGC CAGGCCCTGC TGCTCGATGC CACGCCGATC
ACCGAAGGGC CGGGCGAGGG CGAGCGGCAC CTGGCCGGCG GCCTGTTGAC CCTCTACGAA
CCGAACCGCA TCGGCGAGCG CCTGGCTGCC TTGCACCATG ACCATGCCGA GGGGTTCGAG
ATGCTCCTCG GCGATTCCCA GCCGATCCGC ACCCTGAAGA CCCGTGCGCA GCGCGTGGCG
GCGCTCGACG CGCCGCTGCT GATCCACGGC GAGACCGGTA CCGGCAAGGA ACTGGTGGCG
CGCGGCTGTC ACGCCCTGAG TGCGCGGCAC AACTCGCCGT TCCTGGCGCT GAACTGCGCG
GCGTTGCCGG AGAACCTGGC CGAAAGCGAG CTGTTCGGCT ACGCCCCCGG CGCCTTCACC
GGCGCCCAGC GCGGCGGCAA GCCAGGCCTG CTGGAGCTGG CCCACCAGGG CACGGTGTTC
CTCGACGAGA TCGGCGAGAT GTCCCCCTAT CTGCAAGCCA AGCTGCTGCG CTTCCTCAGC
GACGGCAGCT TCCGCCGGGT CGGCGGCGAC CGCGAGGTGA GGGTCGACGT GCGGATCCTC
AGCGCCACCC ACCGCAACCT GGAGAAGATG GTCGCCGAGG GCAGCTTCCG CGAGGACCTG
TTCTACCGCC TCAACGTGCT CAGCCTGGAA GTCCCGCCGT TGCGAGAGCG CGGCCACGAC
ATCCTGCTGC TGGCGCGGCA CTTCATGCAG CAGGCCTGTG CGCAGATCCA GCGCCCGGTG
TGTCGGCTGG CGCCGGGCAC CTACCCGGCG CTGCTGAGCA ACCGCTGGCC GGGCAACGTG
CGCCAGTTGC AGAATGTGAT CTTCCGCGCC GCTGCGATCT GCGAGAGCAG CCTGGTGGAT
ATCGGCGACC TGGAGATCGC CGGCACCGCC GTGGCGCGGC AGAACGACGG CGAGGTGGGC
AGCCTGGAGG AGGCGGTGGA GGGCTTCGAG AAAGCCCTGC TGGAGAAGCT CTACGTCAGC
TATCCATCGA CCCGCCAGTT GGCGGCGCGC CTGCAAACCT CGCACACCGC CATCGCCCAC
CGCCTGCGCA AGTACGGCAT CGGTCCGCGC GCCTGA
|
|---|
| Protein sequence | MRIHVSFIDR VGITQEVLAL LGGRNLNLDA VEMVPPNVYI DAPTLSPEVL EELRAALLGI
RGVQAMTVVD ILPGQRRRLQ LDALLAAMAD PVLAVDGKGL VLLANPAFSE RCGRDPAGER
LASLFDDETL EDALVEQGFR LPLREVTFMG QALLLDATPI TEGPGEGERH LAGGLLTLYE
PNRIGERLAA LHHDHAEGFE MLLGDSQPIR TLKTRAQRVA ALDAPLLIHG ETGTGKELVA
RGCHALSARH NSPFLALNCA ALPENLAESE LFGYAPGAFT GAQRGGKPGL LELAHQGTVF
LDEIGEMSPY LQAKLLRFLS DGSFRRVGGD REVRVDVRIL SATHRNLEKM VAEGSFREDL
FYRLNVLSLE VPPLRERGHD ILLLARHFMQ QACAQIQRPV CRLAPGTYPA LLSNRWPGNV
RQLQNVIFRA AAICESSLVD IGDLEIAGTA VARQNDGEVG SLEEAVEGFE KALLEKLYVS
YPSTRQLAAR LQTSHTAIAH RLRKYGIGPR A
|
|---|
| |