Gene PA14_32700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_32700 
Symbol 
ID4380553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2839486 
End bp2840400 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content71% 
IMG OID639325199 
Producttranscriptional regulator 
Protein accessionYP_790768 
Protein GI116050413 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0685887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000452911 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACTGGA CCCGCCGCCT GCGCCTGCAA CACCTGCAAC TGCTGGTCAG CCTGATGGAG 
ACCGGCAACC TCAGCGGCAC CGCCCGGGCC GCACACACCA CCCAACCGGG CCTGTCGAAG
TGGCTCAAGG AACTGGAGGA GGACGTCGGC GCGCCGCTGT TCGAGCGCCA CGCCCGTGGC
CTGCGCCCGA CGCCCTACGG CATGACTCTG TTCAACCACG CCCAGCGCGT GCTCACCGAG
ATGGAGCGGG CGCGGCAGAA CCTCGAGGCG ATGCGCAGCG GCAGCGGCAG CCGGGTGCTC
CTCGGCACGT CGCCGGCCTC CGCGCCGAGC CTGGTGCCGC GCGCATTGCG GGCGTTCCTC
GGACGCTACC CCGGGGCCCA GGTGGAACTG CTCGAAGGCA CCATGAACGG CCTTCTCGAA
CGGCTGGAGA AACGCCAGCT CGATGTGGTG GTGGGGCGCC TGGACAACTA TGCGCCGCGC
GCCAGCCTGC GCTGCGAGGT GCTCTACAGC GAGGCGATCG TGGTGATGGC GCGGCCCGGT
CACCCCCTGG CCCAGGCCGC CGCGCTGGAC TGGGAAGACG TGCGGCGCTA CGACTGGATC
GTCTGGCCGC CCGGCTCGCC GATCCGCAGC AAGCTCGACA TGGCCCTGAC CCAGGGCGGC
CGGCAGCCGC CGGCCTACCG CCTGGAGTCA TCGTCGATGC TGGCCAACAT CGAATTGTTG
CGTGGCAGCG ACATGCTATC CATCGGCTCG GCGCGGGTGG TCGAGCACCT CGCCGGGCTC
GGCCTGGTGG CCAGGCTGGC GCTGGAGATT CCCGGCGAGG GCGCGGTGGG TATGTGCTGG
CGCGACGAAC CGCATCGCGA CCGCGCCAGC GAAGACCTGC TGGCCTGCCT GCGCGAAGGC
GCGGCGGCCG AGTAG
 
Protein sequence
MDWTRRLRLQ HLQLLVSLME TGNLSGTARA AHTTQPGLSK WLKELEEDVG APLFERHARG 
LRPTPYGMTL FNHAQRVLTE MERARQNLEA MRSGSGSRVL LGTSPASAPS LVPRALRAFL
GRYPGAQVEL LEGTMNGLLE RLEKRQLDVV VGRLDNYAPR ASLRCEVLYS EAIVVMARPG
HPLAQAAALD WEDVRRYDWI VWPPGSPIRS KLDMALTQGG RQPPAYRLES SSMLANIELL
RGSDMLSIGS ARVVEHLAGL GLVARLALEI PGEGAVGMCW RDEPHRDRAS EDLLACLREG
AAAE