| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_32690 |
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| Symbol | gtdA |
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| ID | 4380554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2838300 |
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| End bp | 2839361 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639325198 |
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| Product | gentisate 1,2-dioxygenase |
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| Protein accession | YP_790767 |
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| Protein GI | 116050414 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3435] Gentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR02272] gentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000000796263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0000100367 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATAACG ACAATTCCAC CGAGAAGCGC GCCGACTTCT ATCGACGCAT CCGCCAGCAG
CACCTCACCC CGCTCTGGGA AGCCCTGCAC AACCTGGTCC CGGCGCAACC CGCCGGCGGC
TGCCAGGCGG CGCTGTGGCG CTATCGCGAA CTGCGCCCGT TCCTGCTCGA GGCAGGCGAC
CTGATCAGCG CCGAGGAAGC GGTGCGCCGC GTGCTGGTGC TGGAGAACCC GGACCTTCCC
GGCCAGTCGG CGATCACCCC GAGCCTCTAC GCCGGCCTGC AACTGATCCT GCCGGGCGAG
ATCGCCCCCA GCCACCGGCA CACCCAGTCG GCCCTGCGCT TCGTCGTCGA GGGCTACGGC
GCCTACACCT CGGTGGACGG CGAACGCACC CGCATGGAGC CGGGCAACTT CATCATCACT
CCGTCCTGGA CCTGGCACGA CCACGGCAAC CGCCCCGCCG CGGAAGGCGG CGAGCCGGTG
GTCTGGCTGG ACGGCCTGGA CATCCCGATG CTGCGTTTCT TCGGCGCCAC CTTCGCCGAG
AGCTACGGCG AACCGGTGCA GCCGTTGCGA CGTGGCGAAG GCGACAGCCT CGCCCGCTAC
GGCAGCAACA TGCTGCCGCT GCGCCACCAG CCGACGACGC CGACCTCGCC GCTGTTCAGT
TACCCCTACG CGCGCAGCCG CGAGGCCCTC GAGCGCCTGG CGCGCCTCGA ACGGCCCGAT
CCCTGGGAAG GCCACAAGCT GCGCTACGTC AACCCGGCCA CCGGCGGCTG GGCCATGCCG
ACCATCGCCA CCTGCCTGCA ACTGCTGCCG GCCGGCTTCC TCGGCCAACC CGCGCGCAGC
ACCGACGCCA GCGTCTATTC GGTGGTGGAA GGCAGCGGCG TGGCGCAAAT CGGCGGCCGG
CGCTTCGCCT TCGAGGCCAA GGATCTGTTC GTCGTGCCCT CCTGGGCCGA GCTGCGCCTG
GAAGCCGGCG CCACCGACTG CGTGCTGTTC AGTTTCTCCG ACCGTCCTGT GCAGCAGGCG
CTCGGCATCC TCCGCGAATC CCGCGAACCC CTCGCCCACT GA
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| Protein sequence | MHNDNSTEKR ADFYRRIRQQ HLTPLWEALH NLVPAQPAGG CQAALWRYRE LRPFLLEAGD
LISAEEAVRR VLVLENPDLP GQSAITPSLY AGLQLILPGE IAPSHRHTQS ALRFVVEGYG
AYTSVDGERT RMEPGNFIIT PSWTWHDHGN RPAAEGGEPV VWLDGLDIPM LRFFGATFAE
SYGEPVQPLR RGEGDSLARY GSNMLPLRHQ PTTPTSPLFS YPYARSREAL ERLARLERPD
PWEGHKLRYV NPATGGWAMP TIATCLQLLP AGFLGQPARS TDASVYSVVE GSGVAQIGGR
RFAFEAKDLF VVPSWAELRL EAGATDCVLF SFSDRPVQQA LGILRESREP LAH
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